Table 2a:

Gamma statistics and calculation time analysis per patient. PxDose: Prescription dose in Gy(RBE); V_tar: Total Target Volume (CTV or PTV) in cc; #Beams: Number of beams; V_tar(|γ|<=l, for 1%/1mm): Percentage of target volume passing γ criterion for whole treatment plan; V_tot(|γ|<=l, for 1%/1mm): Percentage of whole dose receiving area passing γ criterion for whole treatment plan; V_tot,min(|γ|<=l, for 1%/1mm): Minimum percentage of whole dose receiving area passing y criterion among individual beams; T_total: Total plan calculation time of whole GPU run (including reading in the phase space files) in seconds per million particles(MP); T_GPU: Total plan calculation time of GPU part of the calculation (without reading in the phase space files) in seconds per million particles; Nprotons: Total number of protons in all phase space files for the complete patient plan run in millions.

Patient	PxDose[Gy(RBE)]	Vtar [CC]	# Beams	Vtar(|γ|<=l) (for 1%/1mm) [%]	Vtot(|γ|<=l) (for 1%/1mm) [%]	Vtot,min(|γ|<=l) (for 1%/1mm) [%]	Ttotal [s/MP]	TGPU [s/MP]	Nprotons[MP]
Lung 1	35	439	2	99.5%	97.4%	96.4%	2.8	1.2	77.4
Lung 2	47.5	114	2	99.8%	99.5%	99.2%	2.5	0.8	31.8
Lung 3	45	186	5	100.0%	99.8%	99.4%	2.9	1.3	155.4
Lung 4	75	132	3	99.8%	97.9%	96.8%	3.2	1.5	50.4
Breast 1	50.4	1274	9	99.4%	99.6%	97.4%	2.7	1.2	463.5
Breast 2	50.4	894	5	99.5%	99.7%	99.0%	2.3	0.7	215.0
Breast 3	50	761	4	98.9%	99.3%	98.8%	2.2	0.7	164.0
Breast 4	50.4	813	7	99.4%	99.7%	98.0%	2.3	0.8	273.6
Breast 5	45	904	5	99.6%	99.7%	97.8%	2.7	1.2	172.7
Breast 6	50.4	358	2	99.0%	99.6%	99.7%	2.3	0.7	61.4
Breast 7	45	824	5	99.6%	99.7%	98.3%	2.2	0.7	215.4
HeadNeck 1	60	89	7	100.0%	99.7%	98.7%	2.9	1.0	77.4
HeadNeck 2	60	51	6	99.9%	98.5%	98.0%	2.6	1.0	91.6
HeadNeck 3	60	50	3	99.6%	99.9%	99.3%	2.6	0.6	23.3
HeadNeck 4	60	22	7	100.0%	99.9%	99.6%	2.8	1.0	93.9
HeadNeck 5	54	128	12	99.9%	99.3%	98.2%	2.9	1.3	267.7
HeadNeck 6	60	100	3	99.2%	99.6%	99.1%	2.2	0.5	36.5
HeadNeck 7	60	87	6	99.9%	99.8%	99.3%	2.6	0.9	51.5
HeadNeck 8	60	134	6	99.9%	99.9%	99.0%	2.8	1.0	53.7
HeadNeck 9	66	68	13	100.0%	100.0%	99.2%	2.9	0.8	95.0
HeadNeck 10	66	86	10	100.0%	97.7%	97.3%	2.8	1.1	125.3
HeadNeck 11	76	38	6	100.0%	99.7%	99.2%	2.7	1.0	55.7
Liver 1	7.74	150	2	99.0%	93.9%	92.3%	2.8	1.1	44.6
Liver 2	58.05	139	2	96.9%	93.4%	93.6%	2.5	0.9	44.6
Liver 3	58.05	176	2	99.2%	97.9%	97.1%	2.7	1.1	46.2
Liver 4	52.5	459	2	98.6%	99.4%	97.2%	2.4	0.8	51.5
Prostate 1	45/77	142/124	4	79.1%/76.5%	87.9%	89.9%	2.9	1.4	240.7
Prostate 2	34	66	2	84.8%	89.6%	91.3%	2.8	1.3	83.1
Prostate 3	50/78	149/178	6	58.2%/64.2%	86.6%	88.1%	3.0	1.5	451.4
Prostate 4	45/79	146/128	4	63.4%/66.6%	87.7%	89.2%	3.0	1.5	290.3