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. 2021 Jan 6;20:16. doi: 10.1186/s12936-020-03544-7

Table 1.

Primers name, gene target, sequence and method for the P. falciparum resistance genotyping

Target Primer name/reference Method Seq. 5′→3′
MDR MDR1-pfmdr1-1FK76T21 RT-PCR MDR A and sequencing GTTGAACAAAAAGAGTACCGCTG
MDR2-pfmdr1-1RK76T21 TCGTACCAATTCCTGAACTCAC
MDR3-pfmdr1-2FK76T21 Sequencing TTTCCGTTTAAATGTTTACCTGC
MDR4-pfmdr1-2RK76T21 CCATCTTGATAAAAAACACTTCTT
MDR1-1246-pfmdr1-1FD1246Y21 RT-PCR MDR B and sequencing ATGACAAATTTTCAAGATTA
MDR2-1246-pfmdr1-1FD1246Y21 ACTAACACGTTTAACATCTT
MDR3-1246-pfmdr1-1FD1246Y21 Sequencing AATGTAAATGAATTTTCAAACC
MDR4-1246-pfmdr1-1FD1246Y21 CATCTTCTCTTCCAAATTTGATA
Cyt B CytB1-1F22 RT-PCR/sequencing CTCTATTAATTTAGTTAAAGCACAC
CytB2-1R22 ACAGAATAATCTCTAGCACC
CytB3- 2F22 Sequencing AGCAGTAATTTGGATATGTGGAGG
CytB4-2R22 ATTTTTAATGCTGTATCATACCCT
K13 Pfal-k13-2-2PCR20 RT-PCR/sequencing GCCAAGCTGCCATTCATTTG
Pfal-k13-3-2PCR20 GCCTTGTTGAAAGAAGCAGA