Table 1. A list of genes examined for expression in the epigenetic modifying enzymes array plates from Qiagen.
Gene Names | Refseqs | Functional Group |
---|---|---|
KDM1A, KDM4A, KDM4C, KDM5B, KDM5C, KDM6B, MBD2 | NM_015013, NM_014663, NM_015061, NM_006618, NM_004187, NM_001080424, NM_003927 | Demethylase |
DNMT1, DNMT3A, DNMT3B | NM_001379, NM_022552, NM_006892 | DNMT |
ATF2, CDYL, CIITA, CSRP2BP, ESCO1, ESCO2, HAT1, KAT2A, KAT2B, KAT5, KAT6A, KAT6B, KAT7, KAT8, NCOA1, NCOA3, NCOA6 | NM_001880, NM_004824, NM_000246, NM_020536, NM_052911, NM_001017420, NM_003642, NM_021078, NM_003884, NM_006388, NM_006388, NM_006766, NM_012330, NM_007067, NM_032188, NM_003743, NM_181659, NM_014071 | HAT |
HDAC1, HDAC2, HDAC3, HDAC4, HDAC5, HDAC6, HDAC7, HDAC8, HDAC9, HDAC10, HDAC11 | NM_004964, NM_001527, NM_003883, NM_006037, NM_005474, NM_006044, NM_001098416, NM_018486, NM_178425, NM_032019, NM_024827 | HDAC |
CARM1, DOT1L, EHMT2, KMT2A, KMT2C, PRMT1, PRMT2, PRMT3, PRMT5, PRMT6, PRMT7, PRMT8, SETDB2, SMYD3, SUV39H1 | NM_199141, NM_032482, NM_006709, NM_005933, NM_170606, NM_001536, NM_001535, NM_005788, NM_006109, NM_018137, NM_019023, NM_019854, NM_031915, NM_022743, NM_003173 | HMT |
ASH1L, KMT2E, NSD1, SETD1A, SETD1B, SETD2, SETD3, SETD4, SETD5, SETD6, SETD7, SETD8, SETDB1, SUV420H1, WHSC1 | NM_018489, NM_182931, NM_022455, NM_014712, NM_015048, NM_014159, NM_199123, NM_017438, NM_001080517, NM_024860, NM_030648, NM_020382, NM_012432, NM_016028, NM_007331 | HMT Activity (SET Domain Proteins) |
AURKA, AURKB, AURKC, NEK6, PAK1, RPS6KA3, RPS6KA5 | NM_003600, NM_004217, NM_003160, NM_014397, NM_002576, NM_004586, NM_004755 | Phosphorylase |
DZIP3, MYSM1, RNF2, RNF20, UBE2A, UBE2B, USP16, USP21, USP22 | NM_014648, NM_001085487, NM_007212, NM_019592, NM_003336, NM_003337, NM_006447, NM_012475, NM_015276 | Ubiquitinase |
ACTB, B2M, GAPDH, HPRT1, RPLP0 | NM_001101, NM_004048, NM_002046, NM_000194, NM_001002, | Housekeeping Gene |
HGDC | SA_00105 | Genomic DNA Control |
Accession numbers (Refseqs) and gene functional groupings are included.