Table 1. Top 20 differentially expressed genes.
mRNA | logFC | FDR | Expression level |
Deltaa | |
CM gene | UM gene | ||||
KRT14 | -11.346077 | 1.38E-55 | 180056.165 | 65.2375 | 2042931.18 |
KRT6A | -12.533693 | 1.66E-31 | 128946.2816 | 14.25 | 1616173.15 |
KRT16 | -13.59958 | 2.57E-40 | 100335.6893 | 5.65 | 1364523.22 |
KRT6B | -13.709598 | 2.20E-44 | 98880.99029 | 5.4375 | 1355618.67 |
KRT5 | -12.528266 | 2.18E-47 | 94258.47573 | 11.0625 | 1180895.26 |
KRT17 | -11.839915 | 2.14E-57 | 83843.80583 | 15.95 | 992703.557 |
KRT1 | -15.248924 | 8.06E-38 | 56077.99029 | 1.1375 | 855129.009 |
KRT6C | -13.776406 | 2.61E-38 | 55547.1068 | 2.775 | 765239.475 |
FN1 | -4.6306564 | 8.58E-77 | 154051.5728 | 5163.1125 | 713359.903 |
APOD | -5.0761006 | 5.21E-63 | 102886.9612 | 2448.025 | 522264.567 |
SERPINE2 | -2.893698 | 2.24E-42 | 126185.0874 | 15050.6375 | 365141.539 |
KRT10 | -6.3170001 | 6.68E-53 | 55498.26214 | 656.85 | 350582.525 |
COL1A1 | -4.0338005 | 6.78E-64 | 85640.96117 | 4216.8875 | 345458.553 |
S100A9 | -8.4467583 | 8.08E-66 | 33439.74757 | 79.5375 | 282457.466 |
SFN | -11.525871 | 4.37E-63 | 24372.58252 | 6.5375 | 280915.246 |
TNC | -7.1195055 | 1.12E-105 | 37638.42718 | 234.8875 | 267966.988 |
S100A7 | -14.921512 | 2.10E-46 | 15983.15534 | 0.3125 | 238492.842 |
EEF2 | 1.41987278 | 2.07E-38 | 163253.2816 | 363191.325 | 231798.891 |
S100A8 | -10.191145 | 8.08E-75 | 22144.60194 | 16.0625 | 225678.852 |
SPRR1B | -13.252227 | 1.82E-35 | 13745.35922 | 0.8625 | 182156.624 |
FC: Fold change; FDR: False discovery rate. aDelta=|logFC×(CM gene expression level-UM gene expression level)|.