Table 5.

Mendelian concordance (in %) of small variants called on the ONT reads of 4 children from Icelandic trios with respect to the variant calls from their father (F), mother (M), and both parents (F+M). All variants with the FILTER field set to PASS in the VCF files are used by rtg-tools. Best results are highlighted

	Raw			FMLRC			Ratatosk
	F	M	F+M	F	M	F+M	F	M	F+M
I1	99.24	99.28	95.86	99.18	99.21	97.11	99.42	99.42	98.06
I2	99.28	99.22	96.22	99.24	99.22	97.33	99.45	99.44	97.82
I3	99.31	99.33	96.14	99.05	99.13	96.91	98.86	98.25	96.05
I4	99.19	99.38	96.76	99.19	99.33	97.33	99.46	99.50	98.28