Table 2.
ID | Species | CP genome type | Genome size (bp) | LSC size (bp) | SSC size (bp) | IR size (bp) | Genome GC | Total genes | Protein coding genes | rRNA genes | tRNA genes | Total genes uniq |
---|---|---|---|---|---|---|---|---|---|---|---|---|
DG001 | A. morii | I | 152,858 | 86,914 | 17,524 | 24,210 | 37.5% | 129 | 85 | 8 | 36 | 113 |
DG025 | A. anomala | II | 147,145 | 93,695 | 17,820 | 17,815 | 37.5% | 127 | 84 | 8 | 35 | 113 |
DG010 | A. apaensis | II | 147,021 | 93,693 | 17,770 | 17,779 | 37.5% | 127 | 84 | 8 | 35 | 113 |
DG004 | A. biserrata | II | 146,677 | 93,217 | 17,500 | 17,980 | 37.5% | 128 | 84 | 8 | 36 | 114 |
DG023 | A. cartilaginomarginata | II | 146,583 | 94,185 | 17,806 | 17,296 | 37.5% | 128 | 84 | 8 | 36 | 114 |
DG003 | A. cartilaginomarginata var. foliata | II | 147,017 | 93,622 | 17,777 | 17,809 | 37.5% | 127 | 84 | 8 | 35 | 113 |
DG017 | A. dahurica cv. ‘Qibaizhi’ | II | 146,815 | 93,547 | 17,690 | 17,789 | 37.5% | 127 | 84 | 8 | 35 | 113 |
DG019 | A. dahurica cv. ‘Qibaizhi’ | II | 146,811 | 93,547 | 17,630 | 17,817 | 37.5% | 127 | 84 | 8 | 35 | 113 |
KT963037 | A. dahurica | II | 146,918 | 93,605 | 17,677 | 17,818 | 37.5% | 128 | 85 | 8 | 35 | 113 |
DG026 | A. dahurica cv. ‘Hangbaizhi’ | II | 146,810 | 93,546 | 17,630 | 17,817 | 37.5% | 127 | 84 | 8 | 35 | 113 |
DG027 | A. dahurica cv. ‘Hangbaizhi’ | II | 146,835 | 93,571 | 17,630 | 17,817 | 37.5% | 127 | 84 | 8 | 35 | 113 |
HG021 | A. dahurica | II | 147,477 | 93,584 | 18,259 | 17,817 | 37.5% | 128 | 84 | 8 | 36 | 114 |
DG016 | A. dahurica var. formosana | II | 147,097 | 93,322 | 17,625 | 18,075 | 37.5% | 127 | 84 | 8 | 35 | 113 |
DG008 | A. decursiva | II | 146,158 | 92,655 | 17,537 | 17,983 | 37.6% | 128 | 84 | 8 | 36 | 114 |
DG009 | A. kangdingensis | II | 146,529 | 93,853 | 17,530 | 17,573 | 37.5% | 128 | 84 | 8 | 36 | 114 |
DG013 | A. laxifoliata | II | 146,682 | 93,964 | 17,532 | 17,593 | 37.5% | 127 | 84 | 8 | 35 | 113 |
DG011 | A. maowenensis | II | 146,882 | 94,105 | 17,433 | 17,672 | 37.4% | 127 | 84 | 8 | 35 | 113 |
DG006 | A. megaphylla | II | 146,724 | 92,350 | 17,672 | 18,351 | 37.5% | 127 | 84 | 8 | 35 | 113 |
DG020 | A. nitida | II | 146,789 | 93,081 | 17,506 | 18,101 | 37.4% | 127 | 84 | 8 | 35 | 113 |
MF594405 | A. nitida | II | 146,512 | 103,161 | 21,794 | 5836 | 37.5% | 127 | 84 | 8 | 35 | 113 |
DG014 | A. omeiensis | II | 147,814 | 93,787 | 17,635 | 18,196 | 37.6% | 128 | 85 | 8 | 35 | 113 |
DG005 | A. polymorpha | II | 146,982 | 93,442 | 17,754 | 17,893 | 37.6% | 127 | 84 | 8 | 35 | 113 |
DG018 | A. porphyrocaulis | II | 146,859 | 93,543 | 17,682 | 17,817 | 37.5% | 128 | 84 | 8 | 36 | 114 |
DG012 | A. pseudoselinum | II | 148,942 | 91,035 | 17,527 | 20,190 | 37.5% | 128 | 85 | 8 | 35 | 113 |
DG002 | A. tianmuensis | II | 147,308 | 93,239 | 17,637 | 18,216 | 37.5% | 127 | 84 | 8 | 35 | 113 |
DG007 | A. valida | II | 146,833 | 94,103 | 17,530 | 17,600 | 37.5% | 127 | 84 | 8 | 35 | 113 |
KT963036 | A. acutiloba | II | 147,074 | 93,368 | 17,574 | 18,066 | 37.5% | 128 | 85 | 8 | 35 | 113 |
KX352468 | A. acutiloba | II | 147,074 | 93,368 | 17,574 | 18,066 | 37.5% | 128 | 85 | 8 | 35 | 113 |
HG022 | A. gigas | III | 146,916 | 93,163 | 17,579 | 18,087 | 37.6% | 127 | 84 | 8 | 35 | 113 |
KT963038 | A. gigas | III | 146,916 | 93,119 | 17,583 | 18,107 | 37.6% | 128 | 85 | 8 | 35 | 113 |
DG028 | A. sinensis | IV | 140,694 | 101,695 | 17,591 | 10,704 | 37.4% | 121 | 80 | 8 | 33 | 113 |
DG029 | A. sinensis | IV | 140,670 | 101,680 | 17,578 | 10,706 | 37.5% | 121 | 80 | 8 | 33 | 113 |
DG015 | A. tsinlingensis | V | 163,618 | 76,657 | 17,549 | 34,706 | 37.5% | 144 | 99 | 8 | 37 | 114 |