Table 2.
Oxidative and Nitrosative Stresses | |||||||||||
Gene | Starter Sequence (5′->3′) | Product Size [bp] | The Condition of the Reaction | ||||||||
The Initial Activation of the Polymerase | Denaturation | Annealing | Elongation | The HRM Analysis | |||||||
Temperature [°C] | Time [min] | Temperature [°C] | Time [s] | Temperature [°C] | Time [s] | Temperature [°C] | Time [s] | ||||
Cat | F: TTTGAGATTATTGTGTTTGAAA R: TACCTACACCCAAAAAAAAATA |
148 | 95 | 12 | 95 | 15 | 59 | 20 | 72 | 20 | Denaturation at 95 °C for 15 s, reannealing at 60 °C for 1 min and melting from 60 to 95 °C at a ramp rate of 0.2 °C |
Gpx1 | F: GTTGTTTTAGGTTTTGTTGTTG R: AAAACTAAAATCCTCCAACTCT |
102 | 65 | ||||||||
Gpx4 (promotor 2) | F: AGGTTGGAGGTTTAGAGGTTTA R: TCCCCTAAATACAAAAATCTCT |
118 | 59 | ||||||||
Gpx4 (promotor 3) | F: AGGTTGGAGGTTTAGAGGTTTA R: AAAACATAACAAAATCATCTCCC |
147 | 65 | ||||||||
Nos1 (promotor 5) | F: GGGTTTTTAATTTTTTTATTGTG R: CAACCCTCATTAAAAAAACC |
124 | 59 | ||||||||
Nos1 (promotor 7) | F: GTTTGAGATTGGAATTTTTTGG R: CCAAAACATCCAAAAATACACA |
124 | 59 | ||||||||
Tryptophan catabolites pathway | |||||||||||
Gene | Starter sequence (5′->3′) | Product size [bp] | The condition of the reaction | ||||||||
The initial activation of the polymerase | Denaturation | Annealing | Elongation | The HRM analysis | |||||||
Temperature [°C] | Time [min] | Temperature [°C] | Time [s] | Temperature [°C] | Time [s] | Temperature [°C] | Time [s] | ||||
Tph1 | F: GGGAGTTTTGTTTTGGTTTTTA R: TCCTCAACCACAAAAAATCTAA |
132 | 95 | 12 | 95 | 15 | 55 | 20 | 72 | 20 | Denaturation at 95 °C for 15 s, reannealing at 60 °C for 1 min and melting from 60 to 95 °C at a ramp rate of 0.2 °C |
Ido1 | F: TTTGAGTTTTAGTGATTTTGGG R: TTAATATCTAATCCCAATCTCTAAAAC |
100 | 59 | ||||||||
Tdo2 (promoter 1) | F: GATGATTTAGGTGGTTTGAGGT R: CAAAAAAAACAAAATTCATCCA |
123 | 59 | ||||||||
Tdo2 (promoter 2) | F: ATGATTTAGGTGGTTTGAGGTT R: ACCCAATCTACCTAACTAACAAC |
187 | 61.4 | ||||||||
Kmo | F: TTGGTTTAGGGAAGGAAATR: ATAAAAAACTAAACCCAAAACAC | 150 | 55.7 |