Antibodies |
Anti-Pyruvate Dehydrogenase E1-alpha subunit antibody [9H9AF5] |
Abcam |
Abcam Cat# ab110330, RRID:AB_10858459 |
Recombinant Anti-Pyruvate Dehydrogenase E1-alpha subunit (phospho S293) antibody [EPR12200] |
Abcam |
Abcam Cat# ab177461, RRID:AB_2756339 |
Anti-MCU antibody |
Abcam |
Cat#ab121499 |
Tom20 (D8T4N) Rabbit mAb |
Cell Signaling Technology |
Cell Signaling Technology Cat# 42406, RRID:AB_2687663 |
Pyruvate Dehydrogenase (C54G1) Rabbit mAb |
Cell Signaling Technology |
Cell Signaling Technology Cat# 3205, RRID:AB_2162926 |
Bacterial and Virus Strains |
pCMV-CEPIA3mt |
Suzuki et al. |
Addgene Cat#58219, RRID: addgene_58219 |
Lenti-X Packaging Single Shots (VSV-G) |
Takara |
Cat#631275 |
Chemicals, Peptides, and Recombinant Proteins |
Carbonyl cyanide 4-(trifluoromethoxy) phenylhydrazone (FCCP) |
Sigma |
Cat# C2920-10MG |
JC-1 Dye (Mitochondrial Membrane Potential Probe) |
ThermoFisher Scientific |
Cat#T3168 |
Calcium Green-5N, Hexapotassium Salt, cell impermeant |
ThermoFisher Scientific |
Cat#C3737 |
Fura-2, AM, cell permeant |
ThermoFisher Scientific |
Cat#F1221 |
Probenecid |
Enzo |
Cat# ALX-430-113-G005 |
Pluronic F-127 (20% solution in DMSO) |
ThermoFisher Scientific |
Cat#P3000MP |
Ionomycin |
Cayman Chemical |
Cat#10004974 |
MitoTracker Red |
ThermoFisher Scientific |
Cat#M22425
|
CypHer5E NHS Ester |
GE healthcare |
Cat#PA15401 |
BAM15 |
Cayman Chemical |
Cat#17811 |
Antimycin A |
Sigma |
Cat# A8674-25MG |
Rotenone |
Sigma |
Cat#R8875-1G |
Zymosan A S. cerevisiae BioParticles, Texas Red conjugate |
ThermoFisher Scientific |
Cat#Z2843 |
Zymosan A S. cerevisiae BioParticles, unlabeled |
ThermoFisher Scientific |
Cat#Z2849 |
Dorsomorphin dihydrochloride |
Tocris |
Cat#3093 |
6-Aminonicotinamide |
Cayman Chemical |
Cat#10009315 |
6,8-Bid(benzylthio)octanoic acid |
Tocris |
Cat#5348 |
BAPTA-AM, cell permeant chelator |
ThermoFisher Scientific |
Cat#B6769 |
Beta-glucan peptide |
Invivogen |
Cat#tlrl-bgp |
Thapsigargin |
ThermoFisher Scientific |
Cat#T7458 |
Critical Commercial Assays |
CellTiter-Glo® 2.0 Cell Viability Assay |
Promega |
Cat#G9241 |
CellTrace Violet Cell Proliferation Kit, for flow cytometry |
ThermoFisher Scientific |
Cat#C34557
|
CellTrace Yellow Cell Proliferation Kit, for flow cytometry |
ThermoFisher Scientific |
Cat#C34567
|
CellROX Green Reagent, for oxidative stress detection |
ThermoFisher Scientific |
Cat#C10444
|
Pierce LDH Cytotoxicity Assay Kit |
ThermoFisher Scientific |
Cat#88953 |
Experimental Models: Cell Lines |
RAW264.7 ATCC TIB-71 |
ATCC |
ATCC Cat# TIB-71, RRID:CVCL_0493 |
Experimental Models: Organisms/Strains |
S. cerevisiae sy1022 fy5 |
This paper |
Gift: Jeff Smith (UVA) |
Culti-Loops Candida albicans ATCC 10231 |
ThermoFisher Scientific |
Cat#R4601503 |
Mouse: B6;129S-Mcutm1.1Jmol/J
|
The Jackson Laboratory |
IMSR Cat# JAX:029817, RRID:IMSR_JAX:029817 |
Mouse: B6J.B6N(Cg)-Cx3cr1tm1.1(cre)/Jung/J
|
The Jackson Laboratory |
IMSR Cat# JAX:025524, RRID:IMSR_JAX:025524 |
Oligonucleotides |
MCU Exon 5 Forward Primer |
This Paper |
N/A |
5’-TGAACGACGTGAAGACCCT G-3’ |
|
|
MCU Exon 5 Reverse Primer |
This Paper |
N/A |
5’-TTCGTACCTTCTCCAGGGGG-3’ |
|
|
Software and Algorithms |
ImageJ |
|
https://imagej.nih.gov/ij/ |
SPCM |
Wallrabe et al., 2018 |
https://www.becker-hickl.com/products/spcm/ |
Graphpad Prism |
GraphPad Prism |
https://www.graphpad.com/scientific-software/prism/ |
Seahorse Wave |
Agilent |
https://www.agilent.com/en/products/cell-analysis/software-download-for-wave-desktop |
Other |
CFX Connect Real-Time system (Bio-Rad) |
qPCR |
N/A |
XF24 Extracellular Flux Analyzer (Agilent Technologies) |
Seahorse |
N/A |
FlexStation 3 |
In vitro mitochondrial Ca2+ uptake, LDH assay, ATP assay |
N/A |
Leica SP5 × Confocal/Spectral Imaging Microscopy System with White Light Laser |
Live mCa2+ imaging for RAW-3mt |
N/A |
Zeiss Axio Observer with DG4 Illuminator and ORCA-Flash 4.0 V2 CMOS camera |
Fura-2 Ca2+ imaging |
N/A |
LSM880 confocal and a Chameleon multiphoton light source |
Immunofluorescence |
N/A |
Attune NxT equipped with four lasers (488nm, 640nm, 405nm, and 561nm) |
Flow Cytometry |
N/A |
JEOL 1230 Transmission Electron Microscope |
TEM |
N/A |
FUIJ Film LAS-4000 |
Western Blotting |
N/A |