Table 1. Summary of unique SNPs, Indels detected by WGS among all the isolates (n = 39) and in the subset of recent isolates (n = 27, yr 2000).
Totala | Codinga | nSb | Sb | Intergenica | |
Total SNPs | 1,767 | 1,632 | 704 | 928 | 135 |
Recent SNPs | 1,379 | 1,270 | 536 | 734 | 109 |
Totala | Codinga | Intergenica | |||
Total Indels | 485 | 298 | 187 | ||
Recent Indels | 372 | 231 | 141 |
aUnique events are labeled as either coding or intergenic.
bEvents within coding regions are further subdivided into nonsynonymous (nS) or synonymous (S) categories.