| 5mC | 5-methylcytosine |
| 5hmC | 5-hydroxymethylcytosine |
| 5fC | 5-formylcytosine |
| 5caC | 5-carboxylcytosine |
| RRBS/oxRRBS | Reduced representation bisulfite sequencing/oxidative reduced representation bisulfite sequencing |
| DMR | Differentially methylated region |
| DhMR | Differentially hydroxymethylated region |
| IBD | Inflammatory bowel disease |
| H. hepaticus | Helicobacter hepaticus |
| CRC | Colorectal cancer |
| IPA | Ingenuity Pathway Analysis |
| DNMT | DNA methyltransferase |
| TET | Ten-eleven translocation dioxygenases |
| KRuO4 | potassium perruthenate |
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