| ESC | Embryonic Stem Cell |
| NCC | Neuronal Committed Cells |
| INFS | Integrative Nuclear FGFR1 Signaling |
| nFGFR1 | Nuclear Fibroblast Growth Factor Receptor 1 |
| TAD | Topologically Associating Domains |
| RA | Retinoic Acid |
| TF | Transcription Factor |
| CC | Clustering Coefficients |
| DD | Degree Distributions |
| PCA | Principle Component Analysis |
| Diffgene | Differentially Regulated Interacting Gene |
| DiffTAD | Differentially Regulated Gene Containing TAD |
| GO | Gene Ontology |
| PD | PD173074 |
| 3C | Chromosome Conformation Capture |
| ChIP | Chromatin Immunoprecipitation |