Table 1.
Cell types with their top 5 gene markers for vWAT in mice as separately determined for mice exposed to IH or RA.
| Cluster | RA Cell Type | Gene Markers | IH Cell Type | Gene Markers |
|---|---|---|---|---|
| 0 | Neurons-1 | Rbfox1, lgn1, Dnajc6, xph1, Mark1 | Germ cells | Dgat2, Plin4, Pmepa1, Adrb3, Acsl1 |
| 1 | Smooth muscle cells | Gpm6a, Il1rapl1, Muc16, Adamtsl1, Rbfox1 | Podocytes | Arhgap24, Chrm3, Egfr Thsd7a, Rtl4 |
| 2 | Adipocytes | Adrb3, Slc1a3, Atp1a2, Chst1, Lipe | Retinal ganglion cells | Upk1b, Dlgap1, Nkain2, Asxl3, Lars2 |
| 3 | Fibroblasts | Nova1, Thsd7a, Lama2, Abca8a, Arhgap24 | B cells | Dock2, Runx1, Mctp1, Slc9a9, Rbpj |
| 4 | Germ cells | Adrb3, Slc27a1, Smoc1, Acsl1, Tshr | Oligodendrocyte progenitor cells | Il1rapl1, Pkhd1l1, Kcnab1, Rbfox1, Sntg1 |
| 5 | Macrophages-1 | Creb5, Fndc1, Opcml, Fbn1, Pi16 | Macrophages | Creb5, Gpc6, Fndc1, Fbn1, Opcml |
| 6 | Macrophages-2 | Mrc1, Mctp1, F13a1, Slc9a9, Rbpj | Adipocytes-1 | Adrb3, Plin4, Pmepa1, Slc1a3, Chst1 |
| 7 | Endothelial cells | Adgrl4, Cyyr1, Mecom, Cdh13, Etl4 | Endothelial cells | Cyyr1, Shank3, Adgrl4, Etl4, Cdh13 |
| 8 | Neurons-2 | Arhgap15, Dock2, Ubash3b, Ptprc, Alcam | Neurons | Muc16, Il1rapl1, Gpm6a, Nlgn1, Rbfox1 |
| 9 | Mesothelial cells | Upk3b, Gas1, Igfbp6, Igfbp5, Ap4e1 | Adipocytes-2 | Mctp1, Slc1a3, Chst1, Adrb3, Slc27a1 |
| 10 | NA | Adipocytes-3 | Pmepa1, Chst1, Adrb3, Slc1a3, D5Ertd579e | |
| 11 | NA | Adipocytes-4 | Lgals12, Vegfa, Adrb3, Slc27a1, Clstn2 | |
| 12 | NA | Pericytes | Notch3, Abcc9, Sgip1, Adgrl3, Cacna1c |
NA, not available.