AFU	Angio-follicular units
AMPK	AMP-activated protein kinase
BSA	bovine serum albumin
CLEAR	Coordinated Lysosomal Expression and Regulation
CMF-PBS	calcium- and magnesium-free PBS
DDA	data dependent acquisition
DUOX	dual oxidase
DUOXA	dual oxidase activation maturation factor
ER	Endoplasmic reticulum
HCD	higher energy collisional dissociation
HPT	hypothalamus pituitary thyroid
LC3	microtubule-associated protein 1A/1B-light chain 3
LFQ	label-free quantification
mTORC1	mammalian target of rapamycin complex 1
NIS	sodium-iodide symporter
PBS-T	PBS containing 0.3% Tween-20
ROS	reactive oxygen species
SDS	sodium dodecyl sulfate
SK	Sandell-Kolthoff
T3	3′,3,5 triiodothyronine
T4	3,3′,5,5′ tetraiodo-L-thyronine
TFEB	transcription factor EB
Tg	thyroglobulin
TH	thyroid hormones
TPO	thyroid peroxidase
TRH	thyrotropin-releasing hormone
TSH	thyroid stimulating hormone
ULK1	Unc-51 related kinase
WT	wild-type