Table S1. Ion AmpliSeq Comprehensive Cancer Panel target gene list.
1 | ABL1 | CBL | EP300 | GATA2 | LAMP1 | MYD88 | PKHD1 | SMARCA4 | WHSC1 |
2 | ABL2 | CCND1 | EP400 | GATA3 | LCK | MYH11 | PLAG1 | SMARCB1 | WRN |
3 | ACVR2A | CCND2 | EPHA3 | GDNF | LIFR | MYH9 | PLCG1 | SMO | WT1 |
4 | ADAMTS20 | CCNE1 | EPHA7 | GNA11 | LPHN3 | NBN | PLEKHG5 | SMUG1 | XPA |
5 | AFF1 | CD79A | EPHB1 | GNAQ | POT1 | NCOA1 | PML | SOCS1 | XPC |
6 | AFF3 | CD79B | EPHB4 | GNAS | LPP | NCOA2 | PMS1 | SOX11 | XPO1 |
7 | AKAP9 | CDC73 | EPHB6 | GPR124 | LRP1B | NCOA4 | PMS2 | SOX2 | XRCC2 |
8 | AKT1 | CDH1 | ERBB2 | GRM8 | LTF | NF1 | POU5F1 | SRC | ZNF384 |
9 | AKT2 | CDH11 | ERBB3 | GUCY1A2 | LTK | NF2 | PPARG | SSX1 | ZNF521 |
10 | AKT3 | CDH2 | ERBB4 | HCAR1 | MAF | NFE2L2 | PPP2R1A | STK11 | |
11 | ALK | CDH20 | ERCC1 | HIF1A | MAFB | NFKB1 | PRDM1 | STK36 | |
12 | APC | CDH5 | ERCC2 | HLF | MAGEA1 | NFKB2 | PRKAR1A | SUFU | |
13 | AR | CDK12 | ERCC3 | HNF1A | MAGI1 | NIN | PRKDC | SYK | |
14 | ARID1A | CDK4 | ERCC4 | HOOK3 | MALT1 | NKX2-1 | PSIP1 | SYNE1 | |
15 | ARID2 | CDK6 | ERCC5 | HRAS | MAML2 | NLRP1 | PTCH1 | TAF1 | |
16 | ARNT | CDK8 | ERG | HSP90AA1 | MAP2K1 | NOTCH1 | PTEN | TAF1L | |
17 | ASXL1 | CDKN2A | ESR1 | HSP90AB1 | MAP2K2 | NOTCH2 | PTGS2 | TAL1 | |
18 | ATF1 | CDKN2B | ETS1 | ICK | MAP2K4 | NOTCH4 | PTPN11 | TBX22 | |
19 | ATM | CDKN2C | ETV1 | IDH1 | MAP3K7 | NPM1 | PTPRD | TCF12 | |
20 | ATR | CEBPA | ETV4 | IDH2 | MAPK1 | NRAS | PTPRT | TCF3 | |
21 | ATRX | CHEK1 | EXT1 | IGF1R | MAPK8 | NSD1 | RAD50 | TCF7L1 | |
22 | AURKA | CHEK2 | EXT2 | IGF2 | MARK1 | NTRK1 | RAF1 | TCF7L2 | |
23 | AURKB | CIC | EZH2 | IGF2R | MARK4 | NTRK3 | RALGDS | TCL1A | |
24 | AURKC | CKS1B | FAM123B | IKBKB | MBD1 | NUMA1 | RARA | TET1 | |
25 | AXL | CMPK1 | FANCA | IKBKE | MCL1 | NUP214 | RB1 | TET2 | |
26 | BAI3 | COL1A1 | FANCC | IKZF1 | MDM2 | NUP98 | RECQL4 | TFE3 | |
27 | BAP1 | CRBN | FANCD2 | IL2 | MDM4 | PAK3 | REL | TGFBR2 | |
28 | BCL10 | CREB1 | FANCF | IL21R | MEN1 | PALB2 | RET | TGM7 | |
29 | BCL11A | CREBBP | FANCG | IL6ST | MET | PARP1 | RHOH | THBS1 | |
30 | BCL11B | CRKL | FAS | IL7R | MITF | PAX3 | RNASEL | TIMP3 | |
31 | BCL2 | CRTC1 | FBXW7 | ING4 | MLH1 | PAX5 | RNF2 | TLR4 | |
32 | BCL2L1 | CSF1R | FGFR1 | IRF4 | MLL | PAX7 | RNF213 | TLX1 | |
33 | BCL2L2 | CSMD3 | FGFR2 | IRS2 | MLL2 | PAX8 | ROS1 | TNFAIP3 | |
34 | BCL3 | CTNNA1 | FGFR3 | ITGA10 | MLL3 | PBRM1 | RPS6KA2 | TNFRSF14 | |
35 | BCL6 | CTNNB1 | FGFR4 | ITGA9 | MLLT10 | PBX1 | RRM1 | TNK2 | |
36 | BCL9 | CYLD | FH | ITGB2 | MMP2 | PDE4DIP | RUNX1 | TOP1 | |
37 | BCR | CYP2C19 | FLCN | ITGB3 | MN1 | PDGFB | RUNX1T1 | TP53 | |
38 | BIRC2 | CYP2D6 | FLI1 | JAK1 | MPL | PDGFRA | SAMD9 | TPR | |
39 | BIRC3 | DAXX | FLT1 | JAK2 | MRE11A | PDGFRB | SBDS | TRIM24 | |
40 | BIRC5 | DCC | FLT3 | JAK3 | MSH2 | PER1 | SDHA | TRIM33 | |
41 | BLM | DDB2 | FLT4 | JUN | MSH6 | PGAP3 | SDHB | TRIP11 | |
42 | BLNK | DDIT3 | FN1 | KAT6A | MTOR | PHOX2B | SDHC | TRRAP | |
43 | BMPR1A | DDR2 | FOXL2 | KAT6B | MTR | PIK3C2B | SDHD | TSC1 | |
44 | BRAF | DEK | FOXO1 | KDM5C | MTRR | PIK3CA | SEPT9 | TSC2 | |
45 | BRD3 | DICER1 | FOXO3 | KDM6A | MUC1 | PIK3CB | SETD2 | TSHR | |
46 | BRIP1 | DNMT3A | FOXP1 | KDR | MUTYH | PIK3CD | SF3B1 | UBR5 | |
47 | BTK | DPYD | FOXP4 | KEAP1 | MYB | PIK3CG | SGK1 | UGT1A1 | |
48 | BUB1B | DST | FZR1 | KIT | MYC | PIK3R1 | SH2D1A | USP9X | |
49 | CARD11 | EGFR | G6PD | KLF6 | MYCL1 | PIK3R2 | SMAD2 | VHL | |
50 | CASC5 | EML4 | GATA1 | KRAS | MYCN | PIM1 | SMAD4 | WAS |