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. 2021 Jan 11;16(1):e0241022. doi: 10.1371/journal.pone.0241022

Table 1. Primers used to amplify capripoxvirus- and LSDV-specific gene segments.

Oligos Gene/ORF Primers Product size (bp) Thermocycler
Capripoxvirus P32 Forward: 5'-GGAATGATGCCRTCTARATTC-3' 199 Annealing = 55°C
Reverse: 5'-CCCTGAAACATTAGTATCTGT-3' Extension = 30 s
LSDV ORF 011 Forward: 5'-ATGAATTATACTCTTAGYACAGTTAG-3' 1134 Annealing = 52°C
Reverse: 5'-TTATCCAATGCTAATACTACCAG-3' Extension = 80 s
ORF 012 Forward: 5’- ATGGAAAAGGAAAAATTATGTAGCG -3’ 636 Annealing = 52°C
Reverse: 5’- TTATTGTTTGTCAAAAAAGGTGAGATTTC -3’ Extension = 40 s
ORF 036 Forward: 5’- ATGGATGATGATAATACTAATTCATATAG -3’ 606 Annealing = 52°C
Reverse: 5’- TTATTTTTCTACAGCTCTAAACTTCG -3’ Extension = 40 s