Table 1.
Characterization of the Laotian Rock Rat’s mitochondrial genome.
| Position |
Codon |
||||||
|---|---|---|---|---|---|---|---|
| Gene | Length (bp) | Start | End | Intergenic Nucleotides | Start | Stop | Strand |
| tRNA-Phe | 69 | 1 | 69 | 0 | + | ||
| rRNA-12S | 955 | 70 | 1024 | 0 | + | ||
| tRNA-Val | 74 | 1025 | 1098 | 0 | + | ||
| rRNA-16S | 1584 | 1099 | 2682 | 0 | + | ||
| tRNA-Leu | 75 | 2683 | 2757 | 0 | + | ||
| CDS-ND1 | 960 | 2761 | 3720 | 3 | ATG | TAA | + |
| tRNA-Ile | 69 | 3720 | 3788 | −1 | + | ||
| tRNA-Gln | 72 | 3857 | 3786 | −3 | − | ||
| tRNA-Met | 69 | 3865 | 3933 | 7 | + | ||
| CDS-ND2 | 1038 | 3934 | 4971 | 0 | ATC | TAG | + |
| tRNA-Trp | 68 | 4970 | 5037 | −2 | + | ||
| tRNA-Ala | 69 | 5110 | 5042 | 4 | − | ||
| tRNA-Asn | 73 | 5183 | 5111 | 0 | − | ||
| tRNA-Cys | 67 | 5284 | 5218 | 34 | − | ||
| tRNA-Tyr | 66 | 5349 | 5284 | −1 | − | ||
| CDS-COI | 1545 | 5351 | 6895 | 1 | ATG | TAA | + |
| tRNA-Ser | 69 | 6961 | 6893 | −3 | − | ||
| tRNA-Asp | 68 | 6965 | 7032 | 3 | + | ||
| CDS-COII | 684 | 7033 | 7716 | 0 | ATG | TAA | + |
| tRNA-Lys | 66 | 7719 | 7784 | 2 | + | ||
| CDS-ATP8 | 192 | 7786 | 7977 | 1 | ATG | TAA | + |
| CDS-ATP6 | 681 | 7947 | 8627 | −31 | ATG | TAA | + |
| CDS-COIII | 785 | 8627 | 9411 | −1 | ATG | TA— | + |
| tRNA-Gly | 67 | 9411 | 9477 | −1 | + | ||
| CDS-ND3 | 348 | 9479 | 9826 | 1 | ATC | TAA | + |
| tRNA-Arg | 70 | 9828 | 9897 | 1 | + | ||
| CDS-ND4L | 297 | 9900 | 10,196 | 2 | ATG | TAA | + |
| CDS-ND4 | 1375 | 10,190 | 11,564 | −7 | ATG | T—— | + |
| tRNA-His | 70 | 11,565 | 11,634 | 0 | + | ||
| tRNA-Ser | 59 | 11,635 | 11,693 | 0 | + | ||
| tRNA-Leu | 70 | 11,694 | 11,763 | 0 | + | ||
| CDS-ND5 | 1824 | 11,755 | 13,578 | −9 | ATA | TAA | + |
| CDS-ND6 | 528 | 14,102 | 13,575 | −4 | ATA | TAG | − |
| tRNA-Glu | 69 | 14,174 | 14,106 | 3 | − | ||
| CDS-CytB | 1140 | 14,178 | 15,317 | 3 | ATG | TAG | + |
| tRNA-Thr | 69 | 15,318 | 15,386 | 0 | + | ||
| tRNA-Pro | 67 | 15,455 | 15,389 | 2 | − | ||
| Control Region | 908 | 15,456 | 16,363 | 0 | + | ||
+ and − represent heavy and light strand, respectively.