Table 1.
TSS number, its promoter predictive score values, and distance from the start codon of S. cerevisiaea S288C
| Gene name | Gene ID | Location | Number of TSS | Predictive score at cutoff value of 0.8 | Distance from start codon (ATG) |
|---|---|---|---|---|---|
| Alcohol dehydrogenase ADH1 | 854068 | Chromosome XV; NC_001147.6 (c160594-159548) | 1 | 0.99 | − 1545 |
| Alcohol dehydrogenase ADH2 | 855349 | Chromosome XIII; NC_001145.3 (c874337-873291) | 4 | 0.98, 0.93, 0.92, 0.91 | − 130, − 467, − 197, − 177 |
| S-(Hydroxymethyl) glutathione dehydrogenase SFA1 | 851386 | Chromosome IV; NC_001136.10 (159604-160764) | 3 | 1.00, 0.94, 0.89 | − 789, − 159, − 531 |
| Alcohol dehydrogenase ADH3 | 855107 | Chromosome XIII; NC_001145.3 (434788-435915) | 3 | 0.91, 0.89, 0.88 | − 31, − 639, − 657 |
| Alcohol dehydrogenase ADH4 | 852636 | Chromosome VII; NC_001139.9 (15159-16307) | 2 | 0.89, 0.86 | − 95, − 120 |
| Alcohol dehydrogenase ADH5 | 852442 | Chromosome II, NC_001134.8 (533762-534817) | 6 | 0.96, 0.91, 0.86, 0.84, 0.8, 0.8 |
− 90, − 737, − 224, − 703, − 688, − 715 |
| Alcohol dehydrogenase ADH6 | 855368 | Chromosome XIII, NC_001145.3 (c912143-911061) | 3 | 0.94, 0.93, 0.89 | − 215, − 822, − 71 |
| NADP-dependent alcohol dehydrogenase (ADH7) | 850469 | Chromosome III, NC_001135.5 (309070-310155) | 1 | 0.93 | − 63 |
| Putative aryl-alcohol dehydrogenase (AAD3) | 850471 | Chromosome III, NC_001135.5 (313890-314981) | 2 | 0.98, 0.98 | − 133, − 199 |
| Putative aryl-alcohol dehydrogenase AAD4 | 851354 | Chromosome IV, NC_001136.10 (c17577-18566) | 4 | 1.00, 0.96, 0.92, 0.90 | − 759, − 356, − 245, − 42 |
| Aryl-alcohol dehydrogenase (NADP+) activity (AAD6) | 850488 | Chromosome VI, NC_001138.5 (c14305-15431) | 5 | 0.97, 0.89, 0.86, 0.85, 0.80 | − 101, − 518, − 734, − 457, − 28 |
| Putative aryl-alcohol dehydrogenase AAD10 | 853620 | Chromosome X, NC_001142.9 (727405-728271) | 3 | 0.97, 0.86, 0.83 | − 654, − 359, − 171 |
| Putative aryl-alcohol dehydrogenase AAD14 | 855385 | Chromosome XIV, NC_001146.8 (c16118-17248) | 2 | 0.94, 0.81 | − 663, − 452 |
| Putative aryl-alcohol dehydrogenase AAD15 | 853999 | Chromosome XV, NC_001147.6 (c1647-2078) | 2 | 0.94, 0.86 | − 492, − 955 |
| D-Arabinose 1-dehydrogenase (NAD(P)(+)) ARA1 | 852446 | Chromosome II, NC_001134.8 (539987..541021) | 2 | 0.98, 0.95 | − 147, − 92 |
| Glucose-6-phosphate dehydrogenase (ZWF1) | 855480 | Chromosome XIV, NC_001146.8 (c196426..197943) | 4 | 0.99, 0.94, 0.86, 0.85 | − 318, − 145, − 636, − 120 |
| Glycerol 2-dehydrogenase (NADP(+)) GCY1 | 854287 | Chromosome XV, NC_001147.6 (551114-552052) | 4 | 0.99, 0.97, 0.92, 0.91 | − 357, − 85,− 899, − 829 |
| Trifunctional aldehyde reductase/xylose reductase/glucose 1-dehydrogenase (NADP(+))GRE3 | 856504 | Chromosome VIII, NC_001140.6 (323409-324392) | 3 | 1.00, 0.96, 0.90 | − 355, − 778, − 679 |
| Putative dehydrogenase BDH2 | 851238 | Chromosome I, NC_001133.9 (33448-34701) | 2 | 0.99, 0.8 | − 146, − 154 |
| Glucose 1-dehydrogenase (NADP(+)) YPR1 | 851974 | Chromosome IV, NC_001136.10 (1213904-1214842) | 3 | 0.87, 0.83, 0.83 | − 97, − 10, − 252 |
| Hypothetical protein YKL071W | 853792 | Chromosome XI, NC_001143.9 (305114-305884) | 3 | 1.00, 0.95, 0.93 | − 73, − 513, − 881 |
| Hypothetical protein YFL041W-A | 1466401 | Chromosome VI, NC_001138.5 (48734..48925) | 2 | 0.97, 0.84 | − 866, − 115 |
| Pyridoxine 4-dehydrogenase (YPR127W) | 856245 | Chromosome XVI, NC_001148.4 (790083..791120) | 2 | 1.00, 0.83 | − 437, − 776 |
Note: Figures in italics were taken as cutoff point and respective distances for more than one TSS