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. 2019 Feb 5;1:2. doi: 10.1186/s42523-019-0002-6

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© The Author(s) 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 3 — LEfSe results illustrating the lowest-level nested taxa from phylum to genus associated with significant differences in microbiota composition among gut regions: 1 Bacteroidales, 2 Alistipes, 3 uncl. Flavobacteriaceae, 4 Staphylococcus, 5 Lactobacillus, 6 Lachnospiraceae, 7 uncl. Lachnospiraceae, 8 Ruminococcaceae UCG014, 9 Eubacterium coprostanoligenes group, 10 uncl. Ruminococcaceae, 11 uncl. Erysipelotrichaceae, 12 uncl. Veillonellaceae, 13 uncl. Leptotrichiaceae, 14 Oxalobacter, 15 Helicobacter, 16 uncl. Pasteurellaceae, 17 Synergistaceae, 18 Mycoplasma, 19 Actinobacteria, 20 uncl. Coriobacteriaceae. LDA scores for individual OTUs and nested higher-level taxa are presented in Additional file 5