Table 2.
List of differentially expressed transcripts in the caecal tonsils of commercial chickens colonised with different levels of Campylobacter.
| Ensembl gene ID | Gene symbol | Transcript ID | P-value | Q-value |
|---|---|---|---|---|
| ENSGALG00000041380 | BF2 | ENSGALT00000079478 | 2.04355E−06 | 0.027454094 |
| ENSGALG00000032221 | BTN | ENSGALT00000090334 | 4.74E−06 | 0.038294781 |
| ENSGALG00000024357 | BTN | ENSGALT00000000081 | 6.38441E−06 | 0.049299448 |
| ENSGALG00000035351 | ENSGALT00000054801 | 3.10369E−05 | 0.166786206 | |
| ENSGALG00000041380 | BF2 | ENSGALT00000087837 | 5.43846E−05 | 0.243543331 |
| ENSGALG00000040185 | ENSGALT00000050886 | 9.43213E−05 | 0.316789764 | |
| ENSGALG00000033932 | BF1 | ENSGALT00000086848 | 9.24971E−05 | 0.316789764 |
| ENSGALG00000031279 | ENSGALT00000050098 | 0.000108272 | 0.323238598 | |
| ENSGALG00000045597 | ENSGALT00000083909 | 0.000125406 | 0.336954164 | |
| ENSGALG00000031155 | ENSGALT00000077264 | 0.000145678 | 0.355837859 | |
| ENSGALG00000041380 | BF2 | ENSGALT00000077683 | 0.00016873 | 0.377800402 |
| ENSGALG00000023565 | ENSGALT00000031145 | 0.000220897 | 0.423948155 | |
| ENSGALG00000011570 | ILF2 | ENSGALT00000086283 | 0.000216056 | 0.423948155 |
| ENSGALG00000015821 | CCT8 | ENSGALT00000086687 | 0.000249076 | 0.446161849 |
| ENSGALG00000035075 | TAP1 | ENSGALT00000071455 | 0.000284244 | 0.470652875 |
| ENSGALG00000041588 | ENSGALT00000072642 | 0.000297782 | 0.470652875 | |
| ENSGALG00000002321 | GOT2 | ENSGALT00000087793 | 0.000331505 | 0.494845398 |
| ENSGALG00000000895 | NUDC | ENSGALT00000089774 | 0.000390069 | 0.551618808 |
| ENSGALG00000004932 | ATG7 | ENSGALT00000036275 | 0.000609574 | 0.789690044 |
| ENSGALG00000040421 | LYPLA1 | ENSGALT00000086258 | 0.000617198 | 0.789690044 |
| ENSGALG00000026421 | PSMB2 | ENSGALT00000086964 | 0.000706133 | 0.790545526 |
| ENSGALG00000026396 | BG1 | ENSGALT00000088858 | 0.000680119 | 0.790545526 |
| ENSGALG00000038879 | ENSGALT00000086305 | 0.000679203 | 0.790545526 | |
| ENSGALG00000038876 | ENSGALT00000048688 | 0.000890983 | 0.797994287 | |
| ENSGALG00000003015 | SERPINF1 | ENSGALT00000079954 | 0.000766764 | 0.797994287 |
| ENSGALG00000041814 | DYNC2H1 | ENSGALT00000078077 | 0.000865104 | 0.797994287 |
| ENSGALG00000041845 | ZNF692 | ENSGALT00000074567 | 0.000862992 | 0.797994287 |
| ENSGALG00000010175 | HSP90AB1 | ENSGALT00000086912 | 0.000861158 | 0.797994287 |
| ENSGALG00000032378 | ENSGALT00000062451 | 0.000873082 | 0.797994287 | |
| ENSGALG00000030378 | RPL11 | ENSGALT00000088956 | 0.001085374 | 0.940739393 |
| ENSGALG00000033932 | BF1 | ENSGALT00000080529 | 0.001157014 | 0.946182617 |
| ENSGALG00000016885 | STK24 | ENSGALT00000047579 | 0.001217473 | 0.946182617 |
| ENSGALG00000006974 | DDX27 | ENSGALT00000085580 | 0.001187859 | 0.946182617 |
| ENSGALG00000032617 | ENSGALT00000062370 | 0.001267728 | 0.946182617 | |
| ENSGALG00000040179 | ENSGALT00000049453 | 0.001261258 | 0.946182617 |
Q-value is the adjusted P-value for multiple testing using FDR correction.