Table 3.
Sample | Raw reads | Clean reads | Reads trimmed Q20 | Known miRNA | Novel miRNA |
---|---|---|---|---|---|
F1 | 30,286,657 | 18,147,307 | 18,163,822 | 65 | 81 |
F2 | 41,577,946 | 29,989,345 | 30,009,397 | 65 | 93 |
F3 | 36,741,132 | 19,784,177 | 19,811,678 | 66 | 92 |
M1 | 37,370,743 | 28,974,936 | 28,988,411 | 66 | 88 |
M2 | 29,870,390 | 18,486,304 | 18,500,540 | 70 | 74 |
M3 | 37,527,689 | 26,717,472 | 26,755,846 | 74 | 85 |
Raw reads: the statistics of the raw reads; Clean reads: remove the contaminated and low quality read; Reads trimmed Q20: reserve the reads of the percent of Q20 > 80%.