Table 2.
miRNA ID | Sequence (5´-3´) | Length (nt) | MFE (kcal/mol) | MFEI |
---|---|---|---|---|
miR_1 | TTGTTTTTCCTATTCCACCAAT | 22 | −41.8 | 1.2 |
miR_2 | TTTAAGAATTTCAGTTATGC | 20 | −41 | 1.2 |
miR_3 | TAACTGAATATTCTTAAAG | 19 | −41 | 1.2 |
miR_4 | GCTCTCTATATTTCTGTCATC | 21 | −48 | 1 |
miR_5 | TGCTGCTAGTTCATGGATACC | 21 | −83.7 | 1.1 |
miR_6 | CATGTGCCCCTCTTCCCCATC | 21 | −55.3 | 0.8 |
miR_7 | GGCAAGTTGGCCTTGGCTATA | 21 | −69.1 | 1 |
miR_8 | AAGTAGAGTGCAGCCAAGGAT | 21 | −63.5 | 1 |
miR_9 | TCGTCCTGAGACCACATGAGA | 21 | −61.4 | 0.9 |
miR_10 | GGGCAATGGCTTCTTTGGCAGT | 22 | −59.6 | 0.8 |
miR_11 | AACCTTGGTGACTAATTAGATACC | 24 | −83.3 | 2.2 |
miR_12 | TTCTTTCAAACAGGCCCTGAG | 21 | −48.1 | 1.1 |
miR_13 | AATAGAATTCTAGATTAGAAGATC | 24 | −37.9 | 0.8 |
miR_14 | AGAGACCGAGACACGTCATGACGT | 24 | −34.1 | 1 |
miR_15 | CCCGTGCGACCAAAATAAATTATT | 24 | −54.5 | 0.8 |
miR_16 | TATGATTTCCTTTGCTTCCTC | 21 | −72.6 | 1.3 |
miR_17 | TCTTCTCTCTATTGTCACCTT | 21 | −52 | 0.9 |
miR_18 | CATTTGTTTCTTTCTCTCCTTATA | 24 | −50.7 | 1.2 |
miR_19 | AATGGAGCATAGATATTGAATATA | 24 | −82.5 | 1.5 |
miR_20 | TTAGATTTTAAAATTTGGGAC | 21 | −17 | 1.3 |
miR_21 | TGGATGAGACGCTCATTTGAG | 21 | −45.5 | 1.1 |
miR_22 | GACACGGACACATCATTTAAGAGA | 24 | −30.8 | 1 |
miR_23 | AAACGAATTTTCAACGTGGACTGT | 24 | −35.2 | 0.9 |
miR_24 | ACAAGAGGCAGAAAGTAGAGTG | 22 | −57.9 | 1 |
miR_25 | CATCAAGATTGTATACAACTCT | 22 | −93.6 | 1.5 |
miR_26 | CAAATGAGTATTCCATCTACA | 21 | −45.5 | 1.1 |
miR_27 | ATGAAAATCCAGAACTCATAACTC | 24 | −36.4 | 0.9 |
miR_28 | CTAATCAAGGAAATCACAGTAG | 22 | −33.5 | 0.8 |
miR_29 | CGTTCCTGCATGGGGGCACCA | 21 | −87.2 | 1.1 |
miR_30 | GCCGAGAATTGAGATCCATAACTC | 24 | −52.5 | 0.8 |
miR_31 | AAAATAAATTATTATGGTCGTCGT | 24 | −54.5 | 0.8 |
miR_32 | GGTTTGTGCGTGAATCTGACG | 21 | −44.88 | 1.1 |
miR_33 | TAACTGAATATTCTTAAAGCCT | 22 | −41 | 1.2 |
miR_34 | AAGGGTTTCTATCAGAGTTTA | 21 | −48.6 | 0.8 |
miR_35 | TGTAAAACCCTGAATCCAAACCAT | 24 | −79.8 | 1 |
miR_36 | CAATGAGGGCATGTTGTAGGC | 21 | −54.5 | 1 |
miR_37 | GGGCATATCTTCTTTGGCACA | 21 | −56.6 | 0.9 |
miR_38 | ACCAGAGTTTCCATTTTAACATAT | 24 | −71 | 1.7 |
miR_39 | TAAGATGAAAACAAGGATACACT | 23 | −66.4 | 0.9 |
MFEI minimum folding free energy index, MFE minimal free energy