Table 3.
The prediction performance of the proposed method under the independent dataset test.
Sequence segmentation | Dataset | Training mode | Acc | Sp | Sn | MCC |
---|---|---|---|---|---|---|
Continuous-TSSS | S. cerevisiae () | Default mode | 0.9559 | 0.9697 | 0.9429 | 0.9122 |
Embedding training mode | 0.9412 | 0.9697 | 0.9143 | 0.8840 | ||
Two channel mode | 0.9559 | 1.0000 | 0.9143 | 0.9155 | ||
S. pombe () | Default mode | 0.8116 | 0.8788 | 0.7500 | 0.6315 | |
Embedding training mode | 0.7826 | 0.8182 | 0.7500 | 0.5682 | ||
Two channel mode | 0.8116 | 0.9091 | 0.7222 | 0.6389 | ||
K. lactis () | Default mode | 0.9000 | 0.8462 | 0.9412 | 0.7964 | |
Embedding training mode | 0.8667 | 0.8462 | 0.8824 | 0.7285 | ||
Two channel mode | 0.8333 | 0.8182 | 0.8421 | 0.6495 | ||
P. pastoris () | Default mode | 0.9500 | 0.9444 | 0.9583 | 0.8971 | |
Embedding training mode | 0.9167 | 0.9167 | 0.9167 | 0.8281 | ||
Two channel mode | 0.9032 | 0.8947 | 0.9167 | 0.8009 | ||
Skip-TSSS | S. cerevisiae () | Default mode | 0.9901 | 0.9794 | 1.0000 | 0.9804 |
Embedding training mode | 0.9901 | 0.9897 | 0.9906 | 0.9803 | ||
Two channel mode | 0.9951 | 0.9897 | 1.0000 | 0.9902 | ||
S. pombe () | Default mode | 0.7282 | 0.7353 | 0.7212 | 0.4564 | |
Embedding training mode | 0.7379 | 0.6176 | 0.8558 | 0.4880 | ||
Two channel mode | 0.7573 | 0.7843 | 0.7308 | 0.5157 | ||
K. lactis () | Default mode | 0.9213 | 0.8667 | 0.9773 | 0.8482 | |
Embedding training mode | 0.9213 | 0.8667 | 0.9773 | 0.8482 | ||
Two channel mode | 0.8539 | 0.9111 | 0.7955 | 0.7120 | ||
P. pastoris () | Default mode | 0.9454 | 0.9318 | 0.9579 | 0.8907 | |
Embedding training mode | 0.9727 | 0.9659 | 0.9789 | 0.9453 | ||
Two channel mode | 0.9617 | 0.9432 | 0.9789 | 0.9238 |