Table 1a. Table 1a: Oncogenes in HGSOC.
GENE | CHR | FREQUENCY OF ALTERATION | FUNCTIONS | OUTCOME | REF | |||||
---|---|---|---|---|---|---|---|---|---|---|
REPORT(N) | TCGA (N=316) | IN VITRO | IN VIVO | REPORT | TCGA | |||||
AMP | EXP (RNA/PTN) | AMP | EXP (RNA) | |||||||
RAB25 | 1q22 | 54% (52) | 88.7% (62) | 6.9% | - | Cell proliferation, prevents apoptosis & anoikis | Ectopic expression induced tumors | ↓ PFS & OS | NS | [84] |
CXCR2 | 2q35 | NA | 69.2% (13) | 0.3% | 3.8% | Cell cycle progression & angiogenesis | Knockdown reduced tumor growth | ↓ PFS & OS | NS | [85] |
TMEM158 | 3q21.3 | NA | 84% (25) | 1.58% | 4.43% | Cell proliferation ,cell cycle progression, adhesion & invasion | Knockdown reduced tumor growth | NA | NS | [86] |
RPL22L1 | 3q26.2 | NA | NA | 18.6% | 3.4% | EMT, Invasion & metastasis | Ectopic expression induced tumors | NA | ↑ OS | [87] |
USP13 | 3q26.33 | NA | NA | 16.1% | 6.32% | Cell proliferation & colony formation | Knockdown reduced tumor growth & metastatic nodules | ↓ OS | NS | [88] |
TRIM52 | 5q35.3 | NA | 90% (192) | 1.26% | 5.37% | Cell proliferation, migration, invasion & prevents apoptosis | Knockdown reduced tumor growth | NA | PFS | [89] |
FABP4 | 8q21.13 | NA | NA | 1.2% | 10% | Cell migration & invasion | Ectopic expression induced tumors & metastatic nodules | ↓ PFS & OS | NS | [90] |
YAP | 11q22.1 | NA | 22.64% (106) | 4.7% | 4.4% | Cell proliferation, resistance, cell migration & anchorage-independent growth | Knockdown reduced tumor growth & metastatic nodules | ↓ PFS | NS | [91] |
URI1 | 19p12 | 9.4% (434) | 34.9% (475) | 17.4% | 9.1% | Cell survival & cisplatin resistance | Knockdown reduced tumor growth | ↓ PFS | OS | [92] |
NOTCH3 | 19p13.12 | NA | 35.3% (44) | 11.7% | 4.1% | Cell proliferation, prevents apoptosis & anoikis | Knockdown reduced tumor growth & tumor nodules | NA | OS | [93] |
ZNF217 | 20q13.2 | 59% (44) | NA | 4.4% | 1.5% | Proliferation & Metastasis | Ectopic expression induced tumors & metastasis | ↓ PFS | NS | [94] |
KLF8 | Xp11.21 | NA | 76.3% (55) | 0% | Transformation of Ovarian epithelial cells | Ectopic expression induced tumors | NA | - | [95] |
The above mentioned genes are altered in ≥10% of patients with HGSOC