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. 2021 Jan 13;11:972. doi: 10.1038/s41598-020-79611-5

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© The Author(s) 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Alignment of F. novicida LdcF, E. coli LdcI and LdcC, and P. aeruginosa LdcA using Clustal Omega. Partially and fully conserved residues are annotated with ‘:’ and ‘*’ respectively. Domains are coloured according to a rainbow scheme (WING domain: blue, linker: green, PLP-binding domain: yellow, AAT-like domain: orange, C-terminal domain: red), and secondary structure elements are annotated. ppGpp and RavA-interaction sites are highlighted using red and blue transparent boxes respectively.