Table 4.
Phyla identified in the collective AIMS1–4 animals, wild proxies, CC7 [14]a, H2 [20]a, and previously reported [19]. See Supplementary Table S3, Additional file 5 for individual AIMS1–4 values
| Phylum | AIMS1–4 (%) |
Wild proxies (%) |
CC7 [14] (%) |
H2 [20] (%) |
Reported in Brown et al. (2017) [19] |
|---|---|---|---|---|---|
| Proteobacteria | 76.21 | 64.59 | 67.18 | 52.94 | ✓b |
| Bacteroidetes | 15.58 | 25.7 | 2.73 | 37.11 | ✓ |
| Spirochaetes | 2.53 | 0.17 | 0.02 | ✓ | |
| Planctomycetes | 1.89 | 3.13 | 0.09 | 0.04 | ✓ |
| Acidobacteria | 1.83 | 1.22 | 0.01 | ✓ | |
| Chlamydiae | 1.18 | 0.63 | 1.18 | 0.19 | |
| Actinobacteria | 0.58 | 3.31 | 26.27 | 9.33 | ✓ |
| Firmicutes | 0.14 | 0.16 | 2.28 | 0.26 | ✓ |
| Calditrichaeota | 0.02 | 0.03 | |||
| Verrucomicrobia | 0.01 | 0.12 | ✓ | ||
| Cyanobacteria | 0.01 | 0.08 | ✓ | ||
| Gemmatimonadetes | 0.01 | 0.35 | ✓ | ||
| Dependentiae | < 0.01 | 0.07 | 0.10 | ||
| Patescibacteria | < 0.01 | 0.08 | 0.02 | < 0.01 | |
| WPS-2 | < 0.01 | ||||
| Elusimicrobia | < 0.01 | 0.04 | |||
| Lentisphaerae | < 0.01 | < 0.01 | ✓ | ||
| Fusobacteria | < 0.01 | 0.04 | 0.03 | 0.01 | ✓ |
| Marinimicrobia (SAR406 clade) | 0.03 | ||||
| Deferribacteres | 0.01 | ||||
| Tenericutes | 0.04 | ✓ | |||
| Chloroflexi | 0.05 | ✓ | |||
| Kiritimatiellaeota | 0.11 | ||||
| Nitrospirae | 0.01 | 0.01 | ✓ | ||
| Armatimonadetes | 0.03 | 0.05 | ✓ | ||
| Latescibacteria | 0.01 | ||||
| PAUC34f | 0.01 | ||||
| Omnitrophicaeota | 0.03 | ||||
| Fibrobacteres | 0.04 | 0.02 | ✓ | ||
| Epsilonbacteraeota | 0.01 | < 0.01 | < 0.01 |