Table 4.
Adonis2 and linear mixed model statistics of experimental and temporal effects on phylogenetic beta diversity
| Phylogenetic beta diversity | ||||
| Adonis(2)a | R2 (%) | df | Pseudo-F | P |
| Experimental treatment | 1.86 | 1 | 3.87 | 0.01 |
| Sampling moment | 26.87 | 3 | 19.73 | < 0.001 |
| interaction | 2.21 | 3 | 1.64 | 0.08 |
| Within-individual weighted UniFrac distance (yt-yt-1) | ||||
| ANOVA | df | F | P | |
| Experimental treatment | 1, 95 | 3.51 | 0.06 | |
| Sampling interval | 2, 95 | 17.05 | < 0.001 | |
| interaction | 2, 95 | 5.28 | < 0.01 | |
| Contrasts (sampling interval) | effect | Df | χ2 | FDR q |
| High - Low diversity (1–2) | −0.02 | 1 | 0.14 | 0.87 |
| High - Low diversity (2–3) | 0.17 | 1 | 13.21 | < 0.001 |
| High - Low diversity (3–4) | − 0.01 | 1 | 0.03 | 0.87 |
aGroup dispersions are shown in Additional file 1: Fig. 8