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. Author manuscript; available in PMC: 2021 Jan 14.
Published in final edited form as: J Biomed Inform. 2020 Jun 18;108:103473. doi: 10.1016/j.jbi.2020.103473

Table 8.

Spatial role extraction results using predicted spatial indicators: Average Precision (P%), Recall (R%), and F1 measures of 10-fold CV across 5 different fold variations. CI - 95% confidence intervals of the average F1 measures across 50 iterations. BLSTM-C - Bi-LSTM CRF, BERT-L - BERTlarge, BERT-LM - BERTlarge (MIMIC), XLNet-L - XLNetlarge.

Models trajector
landmark
diagnosis
hedge
overall
P R F1 P R F1 P R F1 P R F1 P R F1 (CI)
BLSTM-C 77.7 83.9 80.6 83.0 86.6 84.7 72.3 72.2 71.7 71.5 72.5 71.6 78.8 83.1 80.8 (±0.76)
BERT-L 85.7 73.9 78.1 90.0 77.2 82.8 73.1 75.3 73.8 71.4 71.8 71.1 85.1 75.2 79.3 (±2.16)
BERT-LM 85.8 85.9 85.7 89.6 89.2 89.3 72.5 83.0 77.3 72.0 81.6 76.3 84.8 86.6 85.6 (±0.65)
XLNet-L 82.3 88.9 85.3 86.0 90.9 88.2 73.8 85.6 79.0 73.2 85.3 78.6 82.1 89.1 85.4 (±0.65)