Antibodies |
|
|
Rabbit anti-IRE1α |
Cell Signaling |
Cat. #3294; RRID:AB_823545 |
Rabbit anti-IRE1α |
Santa Cruz |
Cat. #sc-20790; RRID:AB_2098712 |
Mouse anti-Tubulin |
Abcam |
Cat. #ab7291; RRID:AB_2241126 |
Rabbit anti-BiP |
Cell Signaling |
Cat. #3177; RRID:AB_2119845 |
Mouse anti-BiP |
BD Biosciences |
Cat. #610979; RRID:AB_398292 |
Rabbit anti-ATF6α |
Cell Signaling |
Cat. #65880; RRID:AB_2799696 |
Rabbit anti-PERK |
Cell Signaling |
Cat. #3192; RRID:AB_2095847 |
Goat anti-mouse IgG-HRP |
Jackson Immunoreserach |
Cat. #115-035-003; RRID:AB_10015289 |
Goat anti-rabbit IgG-HRP |
Jackson Immunoreserach |
Cat. #111-035-003; RRID:AB_2313567 |
Goat anti-rabbit IgG-Cy3 |
Jackson Immuno Research |
Cat. #711-165-152; RRID:AB_2307443 |
Rabbit anti-Sec61α |
Gift from Dr. Ramanujan Hegde |
N/A |
Rabbit anti-Sec62 |
Gift from Dr. Ramanujan Hegde |
N/A |
Rabbit anti-Sec63 |
Gift from Dr. Ramanujan Hegde |
N/A |
Rabbit anti-HA |
Gift from Dr. Ramanujan Hegde |
N/A |
Rabbit anti-Sec61α |
Gift from Dr. Ramanujan Hegde |
N/A |
Resins |
|
|
mouse anti-HA magnetic beads |
Fisher Scientific |
88836 |
Rat anti-FLAG beads |
Biolegend |
651503 |
StrepTactin-XT Sepharose |
IBA, Germany |
2-1201-010 |
Protein A agarose |
Repligen |
CA-PRI-1000 |
Reagents |
|
|
DMEM |
Corning |
10–013-CV |
FBS |
GIBCO |
16000044 |
Horse Serum |
Sigma |
H0146 |
Penicillin/Streptomycin |
GIBCO |
15140122 |
Lipofectamine 2000 |
Invitrogen |
11668019 |
Doxycycline |
Clontech |
631311 |
Hygromycin B |
Invitrogen |
10687010 |
Blasticidin |
InvivoGen |
ant-bl-1 |
Thapsigargin |
Enzo Life Sciences |
BML-PE180 |
Protease inhibitor cocktail |
Roche |
11873580001 |
Poly L-lysine |
Peptides International |
OKK-3056 |
Digitonin |
EMD Millipore |
300410 |
Fluoromount G |
SouthernBiotech |
0100–01 |
Phos-tag |
Wako |
300–93523 |
West Pico Substrate |
Thermo Scientific |
34080 |
Femto Substrate |
Thermo Scientific |
34095 |
Oligo(dT) primers |
QIAGEN |
79237 |
M-MLV reverse transcripts |
NEB |
M0253 |
Trizol reagent |
Thermo Scientific |
15596026 |
DMSO |
Sigma-Aldrich |
D2650 |
Tunicamycin |
Sigma- Aldrich |
T7765 |
DTT |
AmaricanBio |
3483-12-2 |
PonceauS solution |
Sigma-Aldrich |
P3504 |
Sec62 siRNA |
QIAGEN |
68875 |
Sec63 siRNA |
QIAGEN |
68711 and 68715 |
Experimental Models: Cell line |
|
|
HEK293-Flp-In T-Rex cells |
Invitrogen |
R78007 |
HEK293-Flp-In Sec63−/− |
Sun and Mariappan, 2020 |
N/A |
HEK293-Flp-In Sec62−/− |
This study |
N/A |
HEK293-Flp-In Sec63−/−+Sec63-FLAG |
Sun and Mariappan, 2020 |
N/A |
HEK293-Flp-In Sec63−/−+Sec63 J-mutant-FLAG |
This study |
N/A |
HEK293-Flp-In IRE1α−/−+IRE1α-HA |
Plumb et al., 2015 |
N/A |
HEK293-Flp-In IRE1α−/−+IRE1α-CNX-TMD-HA |
This study |
N/A |
2xStrep-Sec61α |
This study |
N/A |
Recombinant DNA |
|
|
pOG44 |
Invitrogen |
V600520 |
pSpCas9(BB)-2A-Puro |
Addgene |
62988 |
pCR-BluntII |
Addgene |
K2800-20 |
pCDNA5/FRT/TO-empty vector |
Invitrogen |
V652020 |
pCDNA5/FRT/TO-Sec63-Flag |
Sun and Mariappan, 2020 |
N/A |
pCDNA5/FRT/TO-Sec63 J mut-Flag |
This study |
N/A |
pCDNA5/FRT/TO-IRE1α -HA |
Plumb et al., 2015 |
N/A |
pCDNA5/FRT/TO-IRE1α -CNX-TMD-HA |
This study |
N/A |
pCDNA5/FRT/TO-IRE1α-VD/AA -HA |
Plumb et al., 2015 |
N/A |
pCDNA5/FRT/TO-IRE1α-ΔLD -HA |
Plumb et al., 2015 |
N/A |
pCDNA5/FRT/TO-IRE1α-M/A -HA |
Plumb et al., 2015 |
N/A |
pCDNA5/FRT/TO-IRE1α-L/A -HA |
Plumb et al., 2015 |
N/A |
pCDNA5/FRT/TO- Sec63 Δ367-760-FLAG |
This study |
N/A |
pCDNA5/FRT/TO- Sec63 Δ637-760-FLAG |
This study |
N/A |
pCDNA5/FRT/TO- Sec63 Δ230-300-FLAG |
This study |
N/A |
pCDNA5/FRT/TO- Sec63 Δ230-760-FLAG |
This study |
N/A |
Software and Algorithms |
|
|
imageJ |
https://imagej.nih.gov/ij/ |
N/A |
Graphpad |
https://graphpad.com:443/scientific-software/prism/ |
N/A |