Table 2.

Mutations in SARS-COV-2 genes used on PCR target primers.

Accession	Location	Nucleotide variation	Gene	Amino acid change	Mutation type
MN996527	Wuhan, China	21316G>A	Orf1ab	D7018N	Missense
LC528232	Japan	11083T>G	Orf1ab	L3606F	Missense
LC528232	Japan	29642C>T	ORF10		Synonymous mutation
LR757998	Wuhan, China	6968C>A	Orf1ab	L2235I	Missense
MN975262	China	9534C>T	Orf1ab	T3090I	Missense
MN994467	California, USA	1548G>A	Orf1ab	S428N	Missense
GWHABKF00000001	Wuhan, China	8388A>G	Orf1ab	N2708S	Missense
GWHABKF00000001	Wuhan, China
Wuhan	8987T>A	Orf1ab	F2908I	Missense
GWHABKK00000001	Wuhan, China	21316G>A	Orf1ab	D7018N	Missense
GWHABKH00000001	Wuhan, China	6996T>C	Orf1ab	I2244T	Missense
GWHABKJ00000001	Wuhan, China	7866G>T	Orf1ab	G2534V	Missense
GWHABKM00000001	Wuhan, China	21137A>G	Orf1ab	K6958R	Missense
GWHABKM00000001	Wuhan, China	7016G>A	Orf1ab	G2251S	Missense
GWHABKO00000001	Wuhan, China	8001A>C	Orf1ab	D2579A	Missense
GWHABKO00000001	Wuhan, China	9534C>T	Orf1ab	T3090I	Missense
MT188339	Minnesota, USA	17423A>G	Orf1ab	Y5720C	Missense
MT093571	Sweden	17423A>G	Orf1ab	Y5720C	Missense
MT066156	Italy	11083T>G	Orf1ab	L3606F	Missense
LC522974	Japan	28144T>C	ORF8	L84S	Missense
LC522973	Japan	3792C>T	ORF1ab	A1176V	Missense
LC522972	Japan	29303C>T	N	P344S	Missense
LC522972	Japan	11557G>T	ORF1ab	E3764D	Missense
LC521925	Japan	18512C>T	ORF1ab	P6083L	Missense
LC521925	Japan	359_382del	ORF1ab	G32_L39del	Deletion
MN988713	Chicago, USA	490T>A	ORF1ab	D75E	Missense
MN988713	Chicago, USA	3177C>T	ORF1ab	P971L	Missense
MN988713	Chicago, USA	28854C>T	N	S194L	Missense
MN997409	Arizona, USA	11083G>T	ORF1ab	L3606F	Missense
NMDC60013002-01	Wuhan, China	11764T>A	ORF1ab	N3833K	Missense