Table 3.
Annotation of the common up-regulated transcripts associated with low N in two efficient genotypes
| Annotation | Fold change | ||||
|---|---|---|---|---|---|
| TB Nrec | TB Nlow |
BM Nrec |
BM Nlow | ||
| 1 | Hypothetical protein OsJ_01563 (LOC_Os01g22540) | 2.08 | 24.94 | 1.05 | 25.84 |
| 2 | Hypothetical protein OsI_17904* | 81.31 | 665.77 | 16.72 | 272.71 |
| 3 | Hypothetical protein OsJ_10779 | 91.73 | 371.26 | 52.25 | 538.72 |
| 4 | Unknown protein | 1.04 | 35.50 | 2.09 | 20.09 |
| 5 | Os06g0528700 putative flavin-containing monooxygenase | 7.30 | 49.88 | 10.45 | 87.08 |
| 6 | Os03g0184100 expressed protein | 488.88 | 3300.08 | 400.26 | 3009.38 |
| 7 | Hypothetical protein OsI_17904* | 47.95 | 313.70 | 16.72 | 123.44 |
| 8 | Putative RNA helicase/RNAseIII protein | 104.24 | 507.48 | 11.50 | 75.59 |
| 9 | Os11g0120300 unknown protein | 1.04 | 14.39 | 24.04 | 149.27 |
| 10 | Hypothetical protein OsI_17459 | 27.10 | 200.50 | 21.95 | 135.88 |
| 11 | Aspartyl proteinase (LOC_Os11g08200) | 28.14 | 146.78 | 42.85 | 254.53 |
| 12 | Hypothetical protein OsI_22386 | 130.30 | 799.12 | 335.47 | 1946.29 |
| 13 | Os07g0578300 putative subtilisin-like serine protease | 29.19 | 157.33 | 160.94 | 813.35 |
| 14 | Os01g0956200 putative glycosyltransferase | 59.42 | 330.97 | 310.38 | 1516.65 |
| 15 | Hypothetical protein OsJ_05709 (LOC_Os02g09830) | 28.14 | 123.75 | 97.19 | 466.96 |
| 16 | Hypothetical protein OsI_17459 | 93.82 | 387.57 | 70.02 | 331.08 |
| 17 | LOC_Os06g14030 SKOR protein OsJ_20828 | 51.08 | 424.02 | 140.04 | 630.58 |
| 18 | Hypothetical protein OsJ_27967 (LOC_Os08g40919) | 90.69 | 375.10 | 87.79 | 370.31 |
*Multiple predictions of ORFs on the same strand suggest alternative splicing