. 2021 Jan 7;25(1):61–76. doi: 10.1007/s00792-020-01211-y

Table 3.

Read statistics of amplicon sequencing in CO-enriched samples

Samples	Primer sets	Total reads	Merged QC reads	Denoised chimera-free reads	CODH-OTUs		CODH-OTUs within FirmiCODHech subclades
Samples	Primer sets	Total reads	Merged QC reads	Denoised chimera-free reads	# of reads	# of OTUs	# of reads	# of OTUs
JI_enriched_1	F4a_p1	128,964	108,172	67,696	66,676	21	13,462	3
JI_enriched_1	F4c1_p1	221,536	200,466	138,881	138,881	3	138,881	3
JI_enriched_1	F4c1_p2	92,499	54,465	28,819	11,550	4	11,550	4
JI_enriched_1	F4c2_p1	218,325	207,194	158,881	158,800	12	158,368	11
JI_enriched_2	F4c1_p1	111,569	100,723	63,905	63,905	3	63,905	3
JI_enriched_2	F4c1_p2	71,126	66,414	42,240	42,214	1	42,214	1
JI_enriched_2	F4c2_p1	123,192	116,928	96,397	96,190	4	96,104	3