Table 4.
QTL | Chr.a | Peak marker | Pos.[cM]b | SI [cM]c | Pos.RefSeq [bp]d | Potential origin | Adjacent T.aestivum gene | Orthologous gene | Identity | Functional annotation | |
---|---|---|---|---|---|---|---|---|---|---|---|
Start | End | ||||||||||
QLr.jki-1A.1 | 1A | CAP8_c2448_355 | 27.63 | 0–34 | 10069841 | 10069932 | Potenzial | TraesCS1A01G020600 | TRIUR3 04361e | 93.63 | DnaJ domain |
RAC875_c57939_78 | 26.12 | 11571831 | 11571931 | TraesCS1A01G023400 | F775 01617f | 94.93 | |||||
QLr.jki-4A.1 | 4A | Kukri_rep_c109167_89 | 133.99 | 125–151 | 634737614 | 634737686 | BAYP4535 | TraesCS4A01G361100 | TRIUR3 34719e | 99.78 | Protein kinase domain |
F775 31833f | 99.28 | ||||||||||
QLr.jki-4A.2 | 4A | BobWhite_c47168_598 | 171.04 | 168–174 | 726214891 | 726214991 | BAYP4535 | TraesCS4A01G461700 | NB-ARC domain | ||
Excalibur_c46904_84 | 169.52 | 737340474 | 737340573 | TraesCS4A01G481400 | TRIUR3 03302e | 96.59 | |||||
F775 10262f | 96.25 | ||||||||||
QLr.jki-4D.1 | 4D | BS00023112_51 | 69.43 | 58–86 | 455763978 | 455764078 | Julius | TraesCS4D01G285000 | F775 08229f | 100.00 | |
AX-95126745 | 71.96 | 464988433 | 464988533 | TraesCS4D01G294600 | F775 05351f | 99.69 | Cation/calcium exchanger 4 | ||||
QLr.jki-5A.1 | 5A | IAAV2363 | 111.77 | 98–152 | 481901324 | 481901524 | Format | TraesCS5A01G271500 | F775 15669f | 96.01 | |
RAC875_c31670_389 | 138.69 | 514094550 | 514094650 | TraesCS5A01G305200 | F775 21555f | 98.40 | Ankyrin repeats | ||||
QLr.jki-6B.1 | 6B | AX-94557244 | 21.83 | 10–30 | 25914587 | 25914687 | Format | TraesCS6B01G041900 | |||
QLr.jki-6B.2 | 6B | RAC875_c57692_88 | 249.34 | 247–250 | 712673112 | 712673182 | Event | TraesCS6B01G456500 | |||
QLr.jki-7A.1 | 7A | BS00011330_51 | 64.66 | 54–87 | 63112744 | 63112844 | Firl3565 | TraesCS7A01G102800 | TRIUR3 02989e | 99.72 | Pyridoxal-phosphate dependent enzyme |
F775 27910f | 95.24 | ||||||||||
QLr.jki-7A.2 | 7A | wsnp_Ku_c26530_36497050 | 98.82 | 93–111 | 84772316 | 84772460 | Bussard | TRIUR3 06012e | 94.36 | ||
QLr.jki-7A.3 | 7A | BS00011622_51 | 368.31 | 346–379 | 712309001 | 712309084 | Format | TraesCS7A01G533900 | TRIUR3 33918e | 88.99 | Sugar efflux transporter for intercellular exchange |
F775 06947f | 87.19 | ||||||||||
QLr.jki-7D.1 | 7D | AX-94930280 | 18.13 | 15–30 | 16119641 | 16119741 | BAYP4535 | TraesCS7D01G030600 | |||
IACX11794 | 21.65 | 12470235 | 12470390 | TraesCS7D01G026100 | F775 15174f | 97.59 |
a Chromosomal position of QTL
b Position of peak marker based onStadlmeier et al. (2018)
c Support interval
d Position of peak marker at the reference genome RefSeq v1.0
e Triticum urartu
f Aegilops tauschii