Table 2.
The percentage of individuals with half-sib pedigree relationship to a target population selected by the selection criteria from combined DS1 and DS2 dataset for different subset sizes
Selection criteria | Subset size | Pop2 | Pop3 | Pop4 | Pop5 | Pop6 | Pop13 |
---|---|---|---|---|---|---|---|
CDmean | 50 | 0.86 | 0.90 | 0.88 | 0.83 | 0.89 | 0.92 |
Avg_GRM | 0.98 | 0.98 | 0.94 | 0.84 | 0.98 | 0.98 | |
CDmean | 100 | 0.88 | 0.88 | 0.86 | 0.79 | 0.86 | 0.85 |
Avg_GRM | 0.96 | 0.92 | 0.88 | 0.83 | 0.95 | 0.85 | |
CDmean | 200 | 0.88 | 0.86 | 0.79 | 0.76 | 0.89 | 0.43 |
Avg_GRM | 0.95 | 0.89 | 0.85 | 0.83 | 0.94 | 0.45 | |
CDmean | 300 | 0.88 | 0.86 | 0.76 | 0.74 | 0.87 | 0.30 |
Avg_GRM | 0.95 | 0.87 | 0.78 | 0.83 | 0.94 | 0.30 | |
CDmean | 400 | 0.87 | 0.86 | 0.70 | 0.74 | 0.85 | 0.21 |
Avg_GRM | 0.93 | 0.86 | 0.76 | 0.80 | 0.94 | 0.22 | |
CDmean | 500 | 0.842 | 0.84 | 0.70 | 0.68 | 0.84 | 0.18 |
Avg_GRM | 0.93 | 0.86 | 0.76 | 0.79 | 0.95 | 0.18 | |
CDmean | 600 | 0.81 | 0.84 | 0.68 | 0.65 | 0.82 | 0.14 |
Avg_GRM | 0.90 | 0.86 | 0.73 | 0.79 | 0.94 | 0.15 | |
CDmean | 700 | 0.79 | 0.82 | 0.68 | 0.62 | 0.76 | 0.13 |
Avg_GRM | 0.87 | 0.82 | 0.72 | 0.75 | 0.92 | 0.13 | |
CDmean | 800 | 0.76 | 0.74 | 0.66 | 0.62 | 0.74 | 0.11 |
Avg_GRM | 0.75 | 0.83 | 0.69 | 0.72 | 0.84 | 0.11 | |
CDmean | 900 | 0.69 | 0.71 | 0.66 | 0.61 | 0.71 | 0.10 |
Avg_GRM | 0.71 | 0.75 | 0.66 | 0.69 | 0.76 | 0.10 | |
CDmean | 1000 | 0.65 | 0.67 | 0.63 | 0.60 | 0.67 | 0.09 |
Avg_GRM | 0.65 | 0.68 | 0.64 | 0.65 | 0.69 | 0.09 |