Table 1.
Mycoplasma species | Primer designation | Target gene | Gene locus | Product | Amplicon size (bp) | Sequence (5′-3′) | References |
---|---|---|---|---|---|---|---|
M. hominis |
Mhp120’F Mhp120’R |
p120’ | MHO_RS02125 | DUF885 family protein | 190 |
GTTTTAGAACGTAAAATTCTA CATCAGCAGGATTGTTTAAAGCT |
This studya |
Mh16SF Mh16SR |
rrnA16S | MHO_RS01540 | 16S ribosomal RNA | 164 |
GGTAATGGCCCACCAAGACTAT GAAGACCTTCATCGTGCACGCTG |
This studya | |
M. genitalium |
MgPa335F MgPa432R |
mgpA | MG_RS01075 | Adhesin protein | 78 |
GAGAAATACCTTGATGGTCAGCAA GTTAATATCATATAAAGCTCTACCGTTGTTATC |
[43] |
Mg16SF MG16SR |
rrnA16S | MG_RS00775 | 16S ribosomal RNA | 195 |
TAGCTAATACCGCATAAGAACTTT CTCCCGTAGGAGTATGGGCCGTGT |
This studya | |
M. fermentans |
RW 005 RW 004 |
IS1630I | MBIO_RS03870 | IS30-like element | 205 |
GGTTATTCGATTTCTAAATCGCCT GGACTATTGTCTAAACAATTTCCC |
[44] |
Mf16SF Mf16SR |
rrnA16S | MBIO_RS4090 | 16S ribosomal RNA | 186 |
TTGACGGTACCTTATTAGAAA TCTACACAACTCTAGCCTG |
This studya | |
U. urealyticum |
UUureF UUureR |
ureB | UUR8_RS02385 | Urease subunit beta | 100 |
GATCACATTTCCACTTATTTGAAACA AAACGACGTCCATAAGCAACTTTA |
[45] |
Uu16SF Uu16SR |
rrnA16S | UUR8_RS00640 | 16S ribosomal RNA | 181 |
TGCCTGGGTAGTACATTCGCAAGAA GACAACCATGCACCACCTGTC |
This studya | |
U. parvum |
UPureF UPureF |
ureB | UPA3_RS02275 | Urease subunit beta | 99 |
GATCACATTTTCACTTGTTTG AAGTG AACGTCGTCCATAAGCAACTTTG |
[45] |
Up16SF Up16SF |
rrnA16S | UPA3_RS00595 | 16S ribosomal RNA | 183 |
CTTTTATATGGGAAGAAACGCT GCATCTAGATTTAATACC |
This studya | |
Human DNA |
HmitoDNAF HmitoDNAR |
MT-CO3 | YP_003024032.1 | Cytochrome c oxidase subunit III | 208 |
GGATAATCCTATTTATTACCTCAGAAG AGACTATGGTGAGCTCAGGTGATTGAT |
This studya |
aPrimers for each gene were designed based on sequences available in GenBank