Table 1.
Statistics of genome assembly, repetitive sequences, and gene annotation.
Genome parameters | Values |
---|---|
Total size | 480.27 Mb |
Scaffold N50 | 44.55 Mb |
Scaffold L50 | 5 scaffolds |
Scaffold N90 | 34.33 Mb |
Scaffold L90 | 10 scaffolds |
Number of scaffolds | 16 452 |
Genome GC content | 35.20% |
Total size of repetitive sequences | 182.5 M |
Long terminal repeat retrotransposons | 137.5 M |
DNA transposons | 19.2 M |
Long interspersed nuclear elements | 21.9 M |
Number of coding genes | 26 022 |
Average gene length | 1139 bp |
Number of non-coding RNAs | 2232 |