Table 1.

Overview of the RNA sequencing data

Sample	Raw Data Reads No.	Bases (bp)	Q30 (bp)	Clean Reads No	Clean Bases (bp)	Clean Reads %	Genome Mapping Rate	Sequencing Mode
C-1	150,897,246	22,634,586,900	21,331,618,679 (94.24%)	137,417,676	20,612,651,400	91.06	125,822,533 (91.56%)	Paired-end,2 × 150 bp
C-2	137,054,082	20,558,112,300	19,407,891,463 (94.4%)	126,612,888	18,991,933,200	92.38	116,736,730 (92.20%)	Paired-end,2 × 150 bp
C-3	138,645,590	20,796,838,500	19,632,609,578 (94.4%)	124,766,544	18,714,981,600	89.98	114,421,545 (91.71%)	Paired-end,2 × 150 bp
E-1	129,518,036	19,427,705,400	18,289,744,390 (94.14%)	117,058,784	17,558,817,600	90.38	107,868,528 (92.15%)	Paired-end,2 × 150 bp
E-2	154,994,906	23,249,235,900	21,875,735,326 (94.09%)	139,996,898	20,999,534,700	90.32	129,086,227 (92.21%)	Paired-end,2 × 150 bp
E-3	130,792,272	19,618,840,800	18,520,223,188 (94.4%)	119,803,500	17,970,525,000	91.59	110,508,187 (92.24%)	Paired-end,2 × 150 bp
Average	140,317,022	21,047,553,300	19,842,970,437 (94.27%)	127,609,381	19,141,407,250	90.95	117,407,291 (92.01%)

Q30: nucleotides with a quality value above 30 in reads

Genome mapping rate: the percentage of reads mapped to the reference genome