Antibodies |
|
|
Anti-Mouse CD45.1 (PB conjugated, clone A20) |
Biolegend |
Cat#110721; RRID: AB_492867 |
Anti-Mouse CD45.1 (APC conjugated, clone A20) |
eBioscience |
Cat#17–0453-81; RRID: AB_469397 |
Anti-Mouse CD45.2 (BV 605 conjugated, clone 104) |
Biolegend |
Cat#109841; RRID: AB_2563485 |
Anti-Mouse CD45.2 (PE conjugated, clone A20) |
eBioscience |
Cat#12–0453-81; RRID: AB_465674 |
Anti-Mouse c-kit/CD117 (APC-Cy7 conjugated, clone 2B8) |
eBioscience |
Cat#25–1171-82; RRID: AB_469644 |
Anti-Mouse CD4 (PE-Cy5 conjugated, clone GK 1.5) |
eBioscience |
Cat#15–0041-82; RRID: AB_468695 |
Anti-Mouse CD4 (FITC conjugated, clone GK1.5) |
eBioscience |
Cat#11–0041-82; RRID: AB_464892 |
Anti-Mouse CDS (PE-Cy5 conjugated, clone 53–6.7) |
eBioscience |
Cat#15–0081-82; RRID: AB_468706 |
Anti-Mouse CDS (FITC conjugated, clone 53–6.7) |
eBioscience |
Cat#11 −0081 −82; RRID: AB_464915 |
Anti-Mouse CD45R/B220 (PE-Cy5 conjugated, clone RA3–682) |
eBioscience |
Cat#15–0452-82; RRID: AB_468755 |
Anti-Mouse CD45R/B220 (PE-Cy7 conjugated, clone RA3–6B2) |
eBioscience |
Cat#25–0452-82; RRID: AB_469627 |
Anti- Mouse/Human CD45R/B220 (FITC conjugated, clone RA3–6B2) |
eBioscience |
Cat#11–0452-82; RRID: AB_465054 |
Anti-Mouse Ly-6G/Gr1 (PE-Cy5 conjugated, clone RB6–8C5) |
eBioscience |
Cat#15–5931-82; RRID: AB_468813 |
Anti-Mouse Ly-6G/Gr1 (PE-Cy7 conjugated, clone RB6–8C5) |
eBioscience |
Cat#25–5931-82; RRID: AB_469663 |
Anti-Mouse CD11b/Mac1 (PE-Cy5 conjugated, clone M1/70) |
eBioscience |
Cat#15–0112-82; RRID: AB_468714 |
Anti-Mouse CD11b/Mac1 (PE-Cy7 conjugated, M1/70) |
eBioscience |
Cat#25–0112-81; RRID: AB_469587 |
Anti-Mouse Ter119 (PE-Cy5 conjugated, clone M1/70) |
eBioscience |
Cat#15–5921-82; RRID: AB_468810 |
Anti-Mouse CD150/SLAM (PE-Cy7 conjugated, clone TC15–12F12.2) |
Biolegend |
Cat#115914; RRID: AB_439797 |
Anti-Mouse CD48 (APC conjugated, clone HM48–1) |
eBioscience |
Cat#17–0481-82; RRID: AB_469408 |
Anti-Mouse CD34 (FITC conjugated, clone RAM 34) |
eBioscience |
Cat#11–0341-82; RRID: AB_465021 |
Anti-Mouse Flk2/Flt3/CD135 (PE conjugated, clone A2F10) |
eBioscience |
Cat#12–1351-82; RRID: AB_465859 |
Anti-Mouse Annexin V (PE conjugated) |
BD PharMingen |
Cat#556422; RRID: AB_2108590 |
Anti-Human CD34 (PB conjugated, clone RAM 34) |
eBioscience |
Cat# 48–0341-82; RRID: AB_2043837 |
DAPI |
Life technologies |
Cat#D1306; RRID: AB_2629482 |
Anti-E-selectin Rat monoclonal anti body (clone 9A9) |
Bio X cell |
Cat# BE0294; RRID: AB_2687816 |
Purified Rat lgG1 lambda isotype control (cloneA110–1) |
BD |
Cat#553993; RRID: AB_395190 |
Anti-Mouse CD184 (BV605 conjugated, clone 2B11) |
BD |
Cat#740378; RRID: AB_2740109 |
Anti-Mouse lgG2b,k (BV605 conjugated, clone R35–38) |
BD |
Cat#563145; RRID: N/A |
Anti-Human CD317 (PE conjugated, clone 26F8) |
eBioscience |
Cat#12–3179-42; RRID: ABJ0596640 |
Anti-Mouse CD317(Biotin conjugated, clone eBio927) |
eBioscience |
Cat#13–3172-82; RRID: AB_763415 |
Bacterial and Virus Strains |
|
|
Mycobacterium avium |
N/A |
strain SmT2151 |
Biological Samples |
|
|
Human Buffy coat samples |
Gulf Coast Regional Blood Center |
https://www.gulfcoastconsortia.org |
Chemicals, Peptides, and Recombinant Proteins |
|
|
Recombinant Mouse IFNy |
eBioscience |
Cat#BMS326 |
Recombinant Human IFNy |
RD Biosystems |
Cat#285-IF-100 |
Recombinant Human Flt3-Ligand |
Preprotech |
Cat#300–19 |
Recombinant Human IL-3 |
Preprotech |
Cat#2 00–03 |
Recombinant Human SCF |
Preprotech |
Cat#300–07 |
Recombinant Human TPO |
Preprotech |
Cat#300–18 |
Recombinant Mouse TGFp |
R&D Biosystems |
Cat#7346-B2/CF |
Mouse E-selectin |
R&D Biosystems |
Cat#575-ES100 |
Mouse P-selectin |
R&D Biosystems |
Cat#737-PS-050 |
Human E-selectin |
R&D Biosystems |
Cat#724-ES-100 |
Mouse CD117 Micro Beads |
MACS Miltenyi Biotec |
Cat#130–091 −224 |
Human CD34 Micro Beads |
MACS Miltenyi Biotec |
Cat#130–046-702 |
CFSE |
Life Technologies |
C34554 |
DDAO |
Life Technologies |
C34553 |
Recombinant human TNFa protein |
Fisher |
PHC3016 |
Tamoxifen |
SantaCruz Biotechnology |
CAS 10540–29-1 |
Critical Commercial Assays |
|
|
NucleoSpin RNA Plus XS kit |
Macherey-Nagel |
Cat# 740990 |
SMARTer® Stranded Total RNA-Seq Kit i/2 - Pico Input Mammalian |
Takara |
Cat# 634411 |
RNAqueous Kit |
Ambion |
Cat#AM1912 |
Superscript III First-Strand Synthesis Supermix |
Invitrogen |
Cat#18080051 |
iTaq Universal SYBR Green Supermix |
BioRad |
Cat#172–5121 |
BrdU Flow Kit (FITC conjugated) |
BD |
Cat# 559619 |
Deposited Data |
|
|
https://data.mendeley.com/datasets/mhc8b4yn9d/1 |
N/A |
N/A |
Experimental Models: Organisms/Strains |
|
|
CD45.1 mice |
Baylor College of Medicine |
JAX Stock#0066584 |
CD45.2 mice |
Baylor College of Medicine |
Stock#14170 |
Bst2−/−mice |
Jackson Labs |
Stock#029892 |
Ifngr1−/− mice |
Jackson Labs |
Stock#025545 |
CXCL12GFP/+
|
(Toshiaki et al., 2003) |
N/A |
Krt18-CreER (Tg(KRT18-cre/ERT)23Blpn/J |
Dr. Nakada Daisuke, Baylor College of Medicine |
N/A |
B6.Cg-Gt(ROSA)26Sor1m14(CAG”1dToma1o)Hz7 J |
Jackson Labs |
JAX:007914 |
Oligonucleotides |
|
|
sgRNA: BST2+17403843 - UGC GGUACAGAUGGCAAAUC |
Synth ego |
N/A |
sgRNA: BST2–17403817 - GUA CCG CAG AAGAG AAAACC |
Synth ego |
N/A |
sgRNA: BST2+17403810 - CGA UUCUCACGCUUAAGACC |
Synth ego |
N/A |
sgRNA: BST2+17403763 - CGC A.GCGGAGCUGGAGUCCU |
Synth ego |
N/A |
Forward Primer 1: GATCAAG G G AATGTTCAAGCG AAA |
Integrated DNA Technologies |
N/A |
Reverse Primer 1: AGGATCT CCTTTGCTCCCAAAATC |
Integrated DNA Technologies |
N/A |
Forward Primer 2: CATCCTT CTCACTG G ATTCTCCC |
Integrated DNA Technologies |
N/A |
Reverse Primer 2: ATTAAAC CATAAG CTTCAG GACG C |
Integrated DNA Technologies |
N/A |
Forward sequencing primer 1: CTGCAGCCTCT CTCTCTAGACTT |
Integrated DNA Technologies |
N/A |
Forward sequencing primer 2: CTGCAGCCTCT CTCTCTAGACTTC |
Integrated DNA Technologies |
N/A |
Software and Algorithms |
|
|
Prism |
N/A |
N/A |
Flow Jo |
N/A |
N/A |
Fiji |
N/A |
N/A |
Leica Application Suite software (Version 3.3), Leica Microsystems |
N/A |
N/A |
Other |
|
|
StemSpan SFEM |
StemCell Technologies, Inc. |
Cat#9600 |