Table 1.

A Selection of MHC-I epitopes (derived from B-cell epitopes) based on VaxiJen score > 1

Protein name	B-cell epitope sequence	MHC-I epitope sequence	MHC-I binding alleles	VaxiJen score
A
HpaA	NPSVETKTQNDAKNQQPVQTHERMKTSSEHVTPLDFNYPIHIVQAPQN	HVTPLDFNYP	HLA-A*0201 HLA-A*0205 HLA-B*2702 HLA-B*3501 HLA-B*3701 HLA-B*3801 HLA-B*0702	1.1099
	GYQVLRFQDEKALSAQDKR	QDEKALSAQ	HLA-A*1101 HLA-A*3101 HLA-B*2702 HLA-B*5801	1.1087
	PESNRVVHDFAVEVG	VVHDFAVEV	HLA-A*0201 HLA-A*0205 HLA-B*3701 HLA-B*4403 HLA-B*5301	1.3684
	YTYKHSNSGGLDSSNNIIHEALEKNKEDA	KHSNSGGLD	HLA-B*3902 HLA-B*5301 HLA-B*5401	2.2506
FlaA	NALKTSLERLSSGLRINKAAD	RLSSGLRIN	HLA-B*2702 HLA-B*2705 HLA-B*3901 HLA-B*5801	1.5169
	AAQDGQTTESRKAIQSD	QDGQTTESR	HLA-B*2702 HLA-B*5101 HLA-B*5801	2.9528
	VTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRG	NANVKSASG	HLA-B*5401	2.2390
	VNNISITQVNVKAAESQIRDV	VNVKAAESQ	HLA-B*5801	1.9766
FlaB	QNNRDLSSSLEKLSSGLRINKAADD	KLSSGLRIN	HLA-A*0205 HLA-B*3901 HLA-B*5801	1.5519
	AQDGQTLESRRALQSDIQRLLEE	QDGQTLESR	HLA-A*3302 HLA-B*2702 HLA-B*3501 HLA-B*3902 HLA-B*5801	2.2153
	VRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGAM	NANGAQAET	HLA-B*5101 HLA-B*5103	2.4424
	ISVTQVNVKAAESQIRDVDF	VNVKAAESQ	HLA-B*5801	1.9766
Omp18	HKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPVVEEKPAVESGT	GDVSAKTVQ	HLA-A*3302 HLA-B*5101 HLA-B*5102 HLA-B*5103 HLA-B*5201 HLA-B*5801	1.9177
	HKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPVVEEKPAVESGT	EKEEPKQEP	HLA-B*4403 HLA-B*0702	1.3706
	FDFDKYEIKESDQET	EIKESDQET	HLA-A*3302 HLA-B*3701 HLA-B*3901 HLA-B*3902 HLA-B*4403 HLA-B*5301	1.8008
	ISFGETKPKCTQKTRECYKEN	GETKPKCTQ	HLA-A*1101 HLA-A*3101 HLA-B*5401 HLA-B*5801	1.7641

Sl. No	B-cell epitope sequence	MHC-II epitope sequence	MHC-II binding alleles	VaxiJen score
B
HpaA	NPSVETKTQNDAKNQQPVQTHERMKTSSEHVTPLDFNYPIHIVQAPQN	VQTHERMKTSSEHVT	HLA-DRB1*1302 HLA-DRB1*0901 HLA-DRB1*0701 HLA-DRB1*0301 HLA-DRB1*0405	1.2231
	NPSVETKTQNDAKNQQPVQTHERMKTSSEHVTPLDFNYPIHIVQAPQN	PSVETKTQNDAKNQQ	HLA-DRB1*0802 HLA-DRB1*1302 HLA-DRB4*0101 HLA-DRB3*0101	1.6689
	GYQVLRFQDEKALSAQDKR	LRFQDEKALSAQDKR	HLA-DRB1*0401 HLA-DQA1*0401 HLA-DPA1*0103 HLA-DRB5*0101	1.1177
	YTYKHSNSGGLDSSNNIIHEALEKNKEDA	YTYKHSNSGGLDSSN	HLA-DRB1*0101 HLA-DQA1*0501 HLA-DRB1*0401 HLA-DRB3*0101 HLA-DRB1*0405	1.3437
FlaA	AAQDGQTTESRKAIQSD	QDGQTTESRKAIQSD	HLA-DQA1*0301 HLA-DQA1*0102 HLA-DQA1*0401 HLA-DRB1*0701 HLA-DQA1*0501	1.7622
	VTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRG	ASGNQSLGSGVTTLR	HLA-DQA1*0301 HLA-DPA1*0301 HLA-DRB1*0405 HLA-DQA1*0501 HLA-DPA1*0201	1.3656
	VTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRG	NANVKSASGANYNAV	HLA-DRB1*1101 HLA-DRB3*0101 HLA-DQA1*0301 HLA-DQA1*0501 HLA-DPA1*0103	1.6352
	VNNISITQVNVKAAESQIRDV	NISITQVNVKAAESQ	HLA-DQA1*0101 HLA-DRB3*0101	1.6160
FlaB	AQDGQTLESRRALQSDIQRLLEE	QDGQTLESRRALQSD	HLA-DRB1*1101 HLA-DQA1*0102 HLA-DRB1*0802 HLA-DRB1*0301 HLA-DRB1*0901	1.2748
	VRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGAM	ETNSQGIGAGVTSLK	HLA-DQA1*0102 HLA-DQA1*0301 HLA-DRB1*0101 HLA-DQA1*0401 HLA-DRB1*0301	1.7236
	VRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGAM	GANANGAQAETNSQG	HLA-DRB1*0401 HLA-DQA1*0501 HLA-DRB1*0405 HLA-DRB4*0101 HLA-DPA1*0103	2.3765
	ISVTQVNVKAAESQIRDVDF	QVNVKAAESQIRDVD	HLA-DPA1*0103 HLA-DQA1*0101 HLA-DRB1*1201 HLA-DRB1*1501 HLA-DPA1*0301	1.6015
Omp18	HKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPVVEEKPAVESGT	KMDNKTVAGDVSAKT	HLA-DQA1*0501 HLA-DRB1*0401 HLA-DRB1*0802 HLA-DRB3*0101 HLA-DRB1*0301	1.7244
	HKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPVVEEKPAVESGT	NKTVAGDVSAKTVQT	HLA-DQA1*0401 HLA-DRB1*0802 HLA-DQA1*0301 HLA-DRB1*0901 HLA-DRB1*1302	1.4458
	FDFDKYEIKESDQET	FDFDKYEIKESDQET	HLA-DPA1*0201 HLA-DPA1*0103 HLA-DRB1*0401 HLA-DRB1*0301 HLA-DRB4*0101	1.3271
	ISFGETKPKCTQKTRECYKEN	GETKPKCTQKTRECY	HLA-DRB1*0301 HLA-DRB1*1201 HLA-DRB1*1101 HLA-DRB1*0701 HLA-DRB5*0101	1.3419