TABLE 1.
Information on samples of Heterobasidion used in this study.
Species | Sample no. | Geographic origin | Host | GenBank accessions |
||||
ITS | nrLSU | RPB1 | RPB2 | GAPDH | ||||
Bondarzewia occidentalis | HHB 14803 | Washington, United States | Picea sitchensis | DQ200923 | DQ234539 | DQ256049 | AY218474 | – |
B. submesenterica | Cui 10724 | Sichuan, China | Abies ernestii | KJ583205 | KJ583219 | KJ651627 | KJ651720 | KJ651752 |
Heterobasidion abietinum | 00053/1 | Trentino, Italy | Picea abies | KJ651451 | KJ651509 | KJ651630 | KJ651723 | KJ651754 |
H. abietinum | 00055/6 | Trentino, Italy | Picea abies | KJ651452 | KJ651510 | KJ651631 | KJ651724 | KJ651755 |
H. abietinum | 00057/2 | Trentino, Italy | Abies alba | KJ651453 | KJ651511 | KJ651632 | KJ651725 | KJ651756 |
H. amyloideum | Cui 12656 | Tibet, China | Pinus | MT146480 | MT446029 | MT157738 | MT157761 | MT157721 |
H. amyloideum | Cui 12274 | Tibet, China | Abies | MT146481 | MT446030 | MT157739 | MT157762 | MT157722 |
H. annosum | 06071/1 | Lazio, Italy | Pinus pinea | KJ651458 | KJ651516 | KF453497 | KF453491 | KJ651761 |
H. annosum | 06125/2 | Krasnoyarsk, Russia | Pinus sylvestris | KJ651459 | KJ651517 | KF453498 | KF453492 | KJ651762 |
H. annosum | 06129/6 | Krasnoyarsk, Russia | Pinus sylvestris | KJ583211 | KJ583225 | KF006499 | KF033133 | KJ651763 |
H. araucariae | 65008 | Queensland, Australia | Araucaria cunninghamii | KJ651462 | KJ651520 | KJ651636 | KJ651729 | KJ651766 |
H. araucariae | 82001 | Queensland, Australia | Araucaria cunninghamii | KJ651463 | KJ651521 | KJ651637 | KJ651730 | KJ651767 |
H. armandii | Dai 17605 | Yunnan, China | Pinus armandii | MT146482 | MT446031 | MT157740 | MT157763 | – |
H. armandii | Dai 17606 | Yunnan, China | Pinus armandii | MT146483 | MT446032 | MT157741 | MT157764 | – |
H. armandii | Dai 17607 | Yunnan, China | Pinus armandii | MT146484 | MT446033 | MT157742 | MT157765 | – |
H. australe | Cui 12602 | Yunnan, China | Pinus sp. | MT146485 | MT446034 | MT157743 | MT157766 | MT157723 |
H. australe | Dai 13507 | Yunnan, China | Pinus sp. | MT146486 | MT446035 | MT157744 | MT157767 | MT157724 |
H. australe | Dai 13863 | Yunnan, China | Pinus sp. | MT146487 | MT446036 | MT157745 | MT157768 | MT157725 |
H. insulare | FPRI 429 | Philippines | Pinus sp. | MT146488 | MT446037 | MT157746 | MT157769 | MT157726 |
H. insulare | Dai 13933 | Chongqing, China | Pinus massoniana | MT146489 | MT446038 | MT157747 | MT157770 | MT157727 |
H. insulare | Dai 15095 | Jiangxi, China | Pinus massoniana | MT146490 | MT446039 | MT157748 | MT157771 | MT157728 |
H. irregulare | 57001/TI | North Carolina, United States | Pinus strobus | KJ651473 | KJ651531 | KJ651638 | KJ651731 | KJ651777 |
H. irregulare | 88010/1 | Vermont, United States | Pinus sp. | KJ651475 | KJ651533 | KJ651640 | KJ651733 | KJ651779 |
H. irregulare | 01062 | Ontario, Canada | Pinus resinosa | KJ651477 | KJ651535 | KJ651642 | KJ651735 | KJ651781 |
H. linzhiense | Cui 7216 | Sichuan, China | Abies sp. | KJ651480 | KJ651538 | KF006524 | KF033148 | KJ651784 |
H. linzhiense | Cui 9645 | Tibet, China | Picea sp. | KJ651481 | KJ651539 | KF033147 | KF006523 | KJ651785 |
H. linzhiense | Dai 5408 | Tibet, China | Picea sp. | KJ651484 | KJ651542 | KF033154 | KF006533 | KJ651788 |
H. occidentale | 79034/TI | Alaska, United States | Picea sp. | KJ651485 | KJ651543 | KJ651645 | KJ651738 | KJ651789 |
H. occidentale | 98004/TI | Oregon, United States | Picea engelmannii | KJ651488 | KJ651546 | KJ651648 | KJ651741 | KJ651792 |
H. occidentale | 98005/TI | Oregon, United States | Abies magnifica var. shastensis | KJ651489 | KJ651547 | KJ651649 | KJ651742 | KJ651793 |
H. orientale | Cui 11637 | Heilongjiang, China | Unknown | MT146491 | MT446040 | MT157749 | MT157772 | MT157729 |
H. orientale | Cui 11815 | Heilongjiang, China | Pinus sp. | MT146492 | MT446041 | MT157750 | MT157773 | MT157730 |
H. orientale | Cui 12026 | Heilongjiang, China | Picea sp. | MT146493 | MT446042 | MT157751 | MT157774 | MT157731 |
H. parviporum | 04121/3 | Artjärvi, Finland | Picea abies | KJ583212 | KJ583226 | KF453493 | KF453499 | KJ651800 |
H. parviporum | 08021/7 | Krasnoyarsk, Russia | Picea abies | KJ651498 | KJ651556 | KF453494 | KF453500 | KJ651803 |
H. parviporum | 08123/TI | Irkutsk, Russia | Picea abies | KJ651500 | KJ651558 | KF453495 | KF453501 | KJ651805 |
H. sp. | Korhonen 05030 | California, United States | Pinus ponderosa | MT146494 | MT446043 | MT157752 | MT157775 | – |
H. sp. | Korhonen 05038 | California, United States | Pinus ponderosa | MT146495 | MT446044 | MT157753 | MT157776 | – |
H. sp. | Korhonen 05039 | California, United States | Pinus ponderosa | MT146496 | MT446045 | MT157754 | MT157777 | – |
H. subinsulare | Dai 13842 | Yunnan, China | Pinus sp. | MT146497 | MT446046 | MT157755 | MT157778 | MT157732 |
H. subinsulare | Li 140804-30 | Yunnan, China | Pinus sp. | MT146498 | MT446047 | MT157756 | MT157779 | MT157733 |
H. subparviporum | Cui 6961 | Hubei, China | Abies fargesii | KJ651504 | KJ651562 | KJ651658 | KJ651751 | KJ651809 |
H. subparviporum | Cui 9267 | Tibet, China | Picea sp. | MT146499 | MT446048 | MT157757 | MT157780 | MT157734 |
H. subparviporum | Dai 14803 | Jilin, China | Picea sp. | MT146500 | MT446049 | MT157758 | MT157781 | MT157735 |
H. tibeticum | Cui 12257 | Tibet, China | Pinus sp. | MT146501 | MT446050 | MT157759 | MT157782 | MT157736 |
H. tibeticum | Cui 12335 | Tibet, China | Pinus sp. | MT146502 | MT446051 | MT157760 | MT157783 | MT157737 |
New sequences are shown in bold.