Table 1.
Conserved motifs present in pearl millet PgNACs. Conserved motifs were identified using the online tool MEME with the default parameters
| No. | Motif | Sites | E-value | Width | GO annotation |
|---|---|---|---|---|---|
| 1. | TCCTCCTGGATTTAGATTTCATCCTACTGATGAWGAACTTRTTRNTYATT | 130 | 5.4e-1077 | 50 | BP: Multicellular organism development |
| 2. | AGAMCTAATAGAGCTACTGVWDCTGGATATTGGAAGGCTACTGGAAMKGA | 74 | 1.7e-852 | 50 | CC: chloroplastMF: RNA binding |
| 3. | TTGGAATGAAGAAGACTCTTGTTTTTTATAGAGGAAGAGCTCCTAAGGGA | 77 | 7.1e-802 | 50 | MF: oxygen binding |
| 4. | TGTTATTGCTGAAGTTGATATTTATAAGTTTGATCCTTGGGATCTTCCTG | 149 | 3.9e-805 | 50 | |
| 5. | AAGACTGATTGGATTATGCATGAATATAGACTTGAAGATGCTGATGATGC | 128 | 6.6e-773 | 50 | |
| 6. | AGGAATGGTATTTTTTTTCTCCTAGAGATAGAAAGTATCCTAATGGAGCT | 87 | 1.6e-640 | 50 | |
| 7. | CTGCTGCTCCTGCTCCTGCTCCTATTGTTATTGCTCAAGCTGCTGCTCCT | 145 | 1.2e-566 | 50 | |
| 8. | CTGCTGCTGGAGGAGGAGAAGGATCTTCTTCTGAAGCTGCTGCTGCTGCT | 145 | 5.8e-452 | 50 | CC: mitochondrionCC: chloroplast thylakoid membraneCC: anchored to membrane |
| 9. | TAAGGAAGATTGGGTTCTTTGTAGAGTTTTTTATAAGTCTAGAGCTACTA | 134 | 3.8e-395 | 50 | |
| 10. | TACTCTTACTCATGATTCTGTTATGCCTTCTACTGCTGCTCAAGTTTCTG | 125 | 2.6e-338 | 50 | MF: RNA bindingCC: chloroplast thylakoid membraneMF: transcription factor activityBP: protein transportMF: ATP binding |
| 11. | GCTCCTCCTCCTCCTCCTCCT | 143 | 7.5e-212 | 21 | |
| 12. | TTCCTAAGGTTGAACCTCAAGCTGATGATGGAGGAAATTCTCTTGCTGCT | 125 | 1.3e-259 | 50 | |
| 13. | CTTCTTGCTGATACTACTTCTGGAGCTTTTCAATATTCTTCTCTTCTTT | 125 | 1.6e-172 | 49 | CC: plasma membrane |
| 14. | TTAAGCTTGCTGGAGAAGCTCTTCCTGCTGCTGCTGGATCT | 121 | 3.6e-121 | 41 | |
| 15. | AGAAATTTCTTCTTCTTCTGATTATCTTAAGCTTCCTCCTGAACCTGCTG | 78 | 6.3e-104 | 50 | |
| 16. | TCTTGCTCCTAAGGCTGCTGATGCTGGA | 145 | 1.4e-093 | 28 | CC: chloroplast |
| 17. | GCTGATCCTTCTTCTGCTCCTGTTAAGGCTAAGAGACAAC | 53 | 2.2e-067 | 40 |