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. 2021 Jan 8;17(1):e1009224. doi: 10.1371/journal.pgen.1009224

Table 1. Genes we related with psychiatric traits in the MR and colocalization analysis.

Wald ratio (WR) estimate with standard error (SE) and p-value, coloc (posterior probability of colocalization between gene expression and outcome). WR represents the genetically predicted log odds change in risk per standard deviation (SD) change in gene expression.

outcome exposure gene SNP cytogenic WR SE P coloc
anorexia SUOX rs1081975 12q13.2 -0.366 0.072 3.00x10-7 93.4
bipolar disorder RHEBL1 rs7969091 12q13.12 0.400 0.075 8.63x10-8 98.2
major depressive disorder PTPN1 rs718050 20q13.13 -0.195 0.037 1.92x10-7 98.4
schizophrenia FURIN rs4702 15q26.1 -0.237 0.034 2.55x10-12 100.0
ZNF823 rs72986630 19p13.2 0.238 0.044 4.90x10-8 100.0
THOC7 rs832187 3p14.1 -0.163 0.029 2.57x10-8 99.3
PTPRU rs1498232 1p35.2 -0.256 0.042 1.22x10-9 99.0
FAM85B rs2980436 8p23.1 -0.126 0.023 7.47x10-8 98.9
KCNQ5 rs2492966 6q13 0.241 0.045 1.05x10-7 98.6
LINC00222 rs9398171 6q21 -0.253 0.046 3.05x10-8 98.6
CLCN3 rs10520163 4q33 0.248 0.043 9.19x10-9 97.9
RERE rs2708630 1p36.23 0.193 0.034 1.54x10-8 96.7
SF3B1 rs2564383 2q33.1 0.265 0.040 4.82x10-11 95.6
FTCDNL1 rs281794 2q33.1 -0.167 0.023 7.75x10-13 95.2
FAM86B3P rs2945253 8p23.1 -0.075 0.015 3.54x10-7 94.5
ZC3H7B rs11090045 22q13.2 0.273 0.051 9.77x10-8 93.4
INO80E rs3814880 16p11.2 0.096 0.016 6.45x10-10 92.7
GATAD2A rs2905435 19p13.11 -0.137 0.025 4.11x10-8 92.4
NAT8 rs10179134 2p13.1 0.145 0.028 2.16x10-7 91.4
AC105749.1 rs11706780 3p22.2 -0.245 0.039 4.17x10-10 90.7
PCCB rs527888 3q22.3 -0.175 0.029 8.79x10-10 88.8
AC243562.2 rs12905223 15q25.2 -0.113 0.018 4.82x10-10 87.5
CNTN4 rs6796313 3p26.3 0.313 0.051 6.76x10-10 81.6
NMB rs56864281 15q25.3 0.307 0.051 1.38x10-9 78.8
GOLGA2P7 rs2019611 15q25.2 0.110 0.019 2.64x10-9 75.2
FES rs6224 15q26.1 0.255 0.042 1.58x10-9 70.5