Table 3.
Different kinds of URI representations for chemical compounds observed in LOD Sources.
| Entity Origin | URI Representation | Sources |
|---|---|---|
| ChEBI | http://purl.obolibrary.org/obo/CHEBI/* | LinkedSPL, PubChem, NBDC |
| ExpresssionAtlas, BioSamples | ||
| http://identifiers.org/chebi/CHEBI: | BioModels, PDB, WikiPathways | |
| Bio2RDF, PathwayCommons | ||
| http://identifiers.org/obo.chebi/CHEBI: | BioModels, BioPax, WikiPathways | |
| http://www.ebi.ac.uk/chebi/ | PDB, ChEMBL | |
| http://bio2rdf.org/chebi: | Bio2RDF | |
| PubChem | http://identifiers.org/pubchem.compound/ | Bio2RDF, WikiPathways, NBDC |
| Compound | http://rdf.ncbi.nlm.nih.gov/pubchem/compound/* | WikiPathways, PubChem |
| http://bio2rdf.org/pubchem.compound: | Bio2RDF | |
| http://pubchem.ncbi.nlm.nih.gov/compound/ | NBDC | |
| MeSH | http://purl.bioontology.org/ontology/MESH/* | NBDC, PDB, LinkedSPL |
| http://id.nlm.nih.gov/mesh/YEAR/* | MeSH, DisGenet, PDB | |
| http://identifiers.org/mesh/ | Bio2RDF, DisGenet, PDB | |
| http://www.ncbi.nlm.nih.gov/mesh/ | BioSamples | |
| http://rdf.imim.es/rh-mesh.owl# | DisGenet | |
| http://bio2rdf.org/mesh_resource: | Bio2RDF | |
| http://bio2rdf.org/mesh: | Bio2RDF |
(*) marks the recommended representation(s). Acronyms: (NBDC) National Bioscience Database Center, (PDB) Protein Data Bank, (MeSH) Medical Subject Headings.