Fig 4. Phylogenetic relatedness of grapevine leafroll-associated virus 3 isolates obtained from full-length coat protein sequences, as inferred from a maximum likelihood analysis.

Thirty-five BiH isolates (in bold) and forty-five reference isolates were included in the analysis. The accession number and the origin of each isolate are indicated. The bootstrap consensus tree was inferred from 1000 replicates and the bootstrap values of less than 50% are not presented. Phylogenetic groups are assigned as reported by Maree et al. [59] (groups I-VII) and Diaz-Lara et al. [60] (groups IX and X). Group VIII [59] was not included in phylogenetic analysis because it contained the sequences (JF723301-JF723378) retrieved from the NCBI. The isolate MH521105 (marked with a star) is not assigned to any of phylogenetic group [60], while the divergent isolates from this study and Farooq et al. [58] study (within the group I) are in italics.