Table 11.
Percentage of Top 10 and Top 50 ranked instances of true SMs based on different scoring functions. The mixed scoring is based on the parameter weights determined in Section 2.5.2.
| Scoring Function |
Cluster Type | SeMPI v2 (Top 10) | AntiSMASH v5 (Top 10) | SeMPI v2 (Top 50) | AntiSMASH v5 (Top 50) |
|---|---|---|---|---|---|
| Similarity | PKS | 25.4 | 20.3 | 45.61 | 48.55 |
| MCS | PKS | 36.0 | 22.5 | 56.14 | 49.28 |
| Mixed | PKS | 49.1 | - | 72.81 | - |
| Similarity | NRPS | 50.3 | 45.9 | 64.57 | 61.01 |
| MCS | NRPS | 45.1 | 45.9 | 57.71 | 61.01 |
| Mixed | NRPS | 55.4 | - | 68.57 | - |
| Similarity | Mixed | 25.1 | 22.6 | 46.91 | 41.03 |
| MCS | Mixed | 32.5 | 22.6 | 47.74 | 41.03 |
| Mixed | Mixed | 39.9 | - | 62.14 | - |
| Similarity | All | 33.5 | 29.5 | 52.44 | 49.59 |
| MCS | All | 37.4 | 30.1 | 52.82 | 49.80 |
| Mixed | All | 47.0 | - | 66.54 | - |