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. 2020 Dec 31;12(1):55. doi: 10.3390/genes12010055

Table 2.

Genes associated with primary angle closure glaucoma. SNP: single nucleotide polymorphism.

Gene SNP/Haplotype Protein Product Gene Function Ethnicity Citation
ABCC5 rs1401999 ATP binding cassette subfamily C member 5 Transport across plasma membrane Asian Descent Nongpiur et al., 2014 [142]
ACVR1 rs12997 Activin receptor type-1 protein Bone morphogenic protein pathway signaling Middle Eastern Kondkar et al., 2020 [152]
CALCRL AATACAGAT Calcitonin Receptor Like Receptor Transmembrane domain receptor activity European Descent Awadalla et al., 2012 [153]
CHAT rs1258267 Choline O-Acetyltransferase Production of acetylcholine in presynaptic terminals Multi-Ethnic Khor et al., 2016 [144]
CHAT rs1258267 Choline O-Acetyltransferase Production of acetylcholine in presynaptic terminals Middle Eastern Yousefian et al., 2020 [154]
COL11A1 rs3753841 Collagen Type XI Alpha 1 Chain Produces component of type XI collagen Asian Descent Vithana et al., 2012 [145]
COL11A1 rs3753841 Collagen Type XI Alpha 1 Chain Produces component of type XI collagen European Descent Vithana et al., 2012 [145]
DPM2-FAM102A rs3739821 Dolichol phosphate-mannose (DPM) biosynthesis regulatory protein—Family with sequence similarity 102 member A Regulates synthesis of DPM-role in estrogen activation Multi-Ethnic Khor et al., 2016 [144]
eNOS Intron 4 VNTR repeat Nitric oxide synthase 3 NO production Middle Eastern Ayub et al., 2010 [58]
EPDR1 rs3816415 Mammalian ependymin-related protein 1 Transmembrane protein for calcium-dependent cell adhesion Middle Eastern Yousefian et al., 2020 [154]
EPDR1 rs3816415 Mammalian ependymin-related protein 1 Transmembrane protein for calcium-dependent cell adhesion Multi-Ethnic Khor et al., 2016 [144]
FERMT2 rs7494379 Fermitin Family Member 2 Cell adhesion Middle Eastern Yousefian et al., 2020 [154]
FERMT2 rs7494379 Fermitin Family Member 2 Cell adhesion Multi-Ethnic Khor et al., 2016 [144]
GLIS3 rs736893 GLIS Family Zinc Finger 3 Transcription factor Middle Eastern Yousefian et al., 2020 [154]
GLIS3 rs736893 GLIS Family Zinc Finger 3 Transcription factor Multi-Ethnic Khor et al., 2016 [144]
HGF rs5745718 hepatocyte growth factor Regulates cell growth Asian Descent Awadalla et al., 2011 [141]
HGF rs12536657 hepatocyte growth factor Regulates cell growth Asian Descent Awadalla et al., 2011 [141]
HGF rs12540393 hepatocyte growth factor Regulates cell growth Asian Descent Awadalla et al., 2011 [141]
HGF rs17427817 hepatocyte growth factor Regulates cell growth Asian Descent Awadalla et al., 2011 [141]
HSP70 G+190C polymorphism heat-shock protein 70 Protein folding processes Middle Eastern Ayub et al., 2010 [58]
MMP9 rs2250880 Matrix metalloproteinase-9 Regulates pathological remodeling processes Asian Descent Cong et al., 2009 [139]
MMP9 rs2664538 Matrix metalloproteinase-9 Regulates pathological remodeling processes Asian Descent Wang et al., 2006 [137]
MMP9 rs3818249 Matrix metalloproteinase-9 Regulates pathological remodeling processes European Descent Awadalla et al., 2011 [140]
MMP9 rs17576 Matrix metalloproteinase-9 Regulates pathological remodeling processes European Descent Awadalla et al., 2011 [140]
MMP9 rs17576 Matrix metalloproteinase-9 Regulates pathological remodeling processes Middle Eastern Descent Micheal et al., 2013 [155]
PCMTD-ST18 rs1015213 Protein-L-Isoaspartate (D-Aspartate) O-Methyltransferase Domain Containing 1-suppression of tumorigenicity 18 Protein repair/degradation – tumor suppressor Asian Descent Duvesh et al., 2013 [148]
PLEKHA7 rs11024102 Pleckstrin homology domain-containing family A member 7 Stabilizes E-cadherin junctions Asian Descent Vithana et al., 2012 [145]
SMOC2 rs13208776 SPARC-related modular calcium binding protein 2 Promotes matrix assembly Middle Eastern Al-Dabbagh et al., 2017 [161]
SPATA13 c.1432_1440del; p.478_480del Spermatogenesis Associated Protein 13 Regulates cell adhesion and migration European Descent Waseem et al., 2020 [156]