Table 2.
Overview of different BGCs in marine R. mucilaginosa 50-3-19/20B and 10 other genomes of Rhodotorula deduced by AntiSMASH.
| Rhodotorula Genomes | Genome Assembly Version | Genome Size (Mb) | Total BGCs | NRPS | Terpene | Others | Cf Putative | Cf Fatty Acid |
|---|---|---|---|---|---|---|---|---|
| Marine R. mucilaginosa 50-3-19/20B | marRhodv1 (denovo) | 20.02 | 19 | 1 | 2 | 1 | 14 | 1 |
| R. mucilaginosa IIPL32 | ASM280678v1 | 20.15 | 21 | 1 | 2 | 1 | 16 | 1 |
| R. mucilaginosa RIT389 | RIT389_v1 | 19.7 | 16 | 1 | 2 | 0 | 12 | 1 |
| R. mucilaginosa C2.5t1 | ASM93196v1 | 19.98 | 20 | 1 | 2 | 1 | 15 | 1 |
| R. mucilaginosa JGTA-S1 | ASM305520v1 | 20.2 | 20 | 1 | 2 | 1 | 15 | 1 |
| R. graminis WP1 | Rhoba1_1 | 20.01 | 19 | 1 | 1 | 1 | 15 | 1 |
| R. toruloides NP11 | RHOziaDV1.0 | 20.2 | 19 | 1 | 1 | 1 | 15 | 1 |
| R. taiwanensis MD1149 | ASM292249.1 | 19.6 | 25 | 1 | 3 | 1 | 19 | 1 |
| R. kratochvilovae LS11 | ASM291796v1 | 22.1 | 21 | 1 | 2 | 1 | 16 | 1 |
| Rhodotorula sp. FNED7-22 | FNED7-bin-22 | 16.3 | 5 | 1 | 1 | 0 | 3 | 0 |
| Rhodotorula sp. JG-1b | Rhosp1 | 19.4 | 28 | 1 | 4 | 1 | 21 | 1 |
Note 1: BGCs are predicted by AntiSMASH4, NRPS—Nonribosomal peptide synthetase cluster; Terpene—Terpene cluster; Others—Cluster containing a secondary metabolite-related protein that does not fit into any other category; Cf Fatty Acid—Putative fatty acid cluster identified with the ClusterFinder algorithm and Cf Putative—Putative cluster of unknown type identified with the ClusterFinder algorithm.