Table 2.
The mean copy numbers of virus RNA markers (mean ± standard deviation, log10 copies 100 ml−1) detected with SARS betacoronavirus E-Sarbeco, SARS-CoV-2 N2 and norovirus GII assays in Viikinmäki WWTP influent wastewater sample taken 19–20 April 2020 and stored over 84 days at 4 °C, −20 °C, and −75 °C. The analysis at each time and temperature point was performed from triplicate aliquots. The number of replicates with results above the quantification limit (LOQ) are shown in parenthesis.
Target | Sample fraction | Storage time (days) | RNA copy number at storage temperatures |
Quantification frequency (number of aliquots) | ||
---|---|---|---|---|---|---|
4 °C | −20 °C | −75 °C | ||||
SARS E-Sarbeco |
Supernatant | 29 | 2.6 ± 0.2 (2) | < LOQ (0) | 2.4 (1) | |
64 | 3.1 ± 0.2 (3) | 2.8 ± 0.2 (3) | 2.8 ± 0.0 (2) | |||
84 | 2.9 ± 0.3 (2) | 2.5 (1) | 2.8 ± 0.3 (2) | |||
Total mean ± SE (95% CI): 2.8 ± 0.1 |
Supernatant: 16/27 (59%) | |||||
Pelleta | 84 | 3.4 ± 0.2 (3) | 2.8 ± 0.5 (2) | 3.3 ± 0.0 (2) | ||
Total mean ± SE (95% CI): 3.2 ± 0.2 |
Pellet: 7/9 (78%) |
|||||
SARS-CoV-2 N2 |
Supernatant | 29 | 3.7 ± 0.1 (2) | 3.5 (1) | 3.6 ± 0.1 (2) | |
64 | 3.7 ± 0.2 (3) | 3.7 ± 0.1 (2) | 3.7 ± 0.1 (2) | |||
84 | 3.7 ± 0.2 (2) | 3.4 (1) | 3.6 ± 0.2 (3) | |||
Total mean ± SE (95% CI): 3.6 ± 0.1 |
Supernatant: 18/27 (67%) | |||||
Pelleta | 84 | 4.2 ± 0.1 (3) | 3.9 ± 0.1 (2) | 3.9 ± 0.4 (3) | ||
Total mean ± SE (95% CI): 4.0 ± 0.2 |
Pellet: 8/9 (89%) |
|||||
Norovirus GII | Supernatant | 29 | 4.4 ± 0.2 (3) | 4.8 ± 0.1 (3) | 4.8 ± 0.1 (3) | |
64 | 3.7 ± 0.1 (3) | 3.7 ± 0.1 (3) | 3.8 ± 0.0 (3) | |||
84 | 3.5 ± 0.1 (3) | 3.6 ± 0.3 (3) | 3.7 ± 0.1 (3) | |||
Total mean ± SE (95% CI): 4.0 ± 0.2 |
Supernatant: 27/27 (100%) | |||||
Pelleta | 84 | 3.8 ± 0.2 (3) | 3.0 ± 0.1 (2) | 3.0 ± 0.1 (3) | ||
Total mean ± SE (95% CI): 3.3 ± 0.3 | Pellet: 8/9 (89%) |
The analysis is performed for the particulate fraction (i.e., pellets from pre-centrifugation). SE = standard error, CI = confidence interval.