Table 1.
Genotypic and phenotypic profiles of strains isolated from rectal swabs.
| a Isolate | b PBRT Profile | c CR Genes | d Antibiotic Resistance | e ST | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CN | AK | TOB | TZP | FOS | AMS | CIP | LEV | CXM | SXT | ||||
| Kp_6 | FIIK, FIB KQ | bla KPC | R | R | R | S | S | S | R | S | R | S | 512 |
| Kp_14 | bla KPC | S | S | S | S | S | S | S | S | R | S | ||
| Kp_48 | bla KPC | S | S | S | S | S | S | S | R | R | S | ||
| Kp_56 | bla KPC | S | S | S | S | S | S | S | R | R | S | ||
| Kp_58 | bla KPC | S | S | S | S | R | S | R | R | R | S | ||
| Kp_194 | bla KPC | S | S | S | S | R | S | S | S | R | S | ||
| Kp_282 | bla KPC | S | S | S | S | R | S | S | S | S | S | ||
| Kp_484 | bla KPC | R | R | R | S | S | S | R | R | R | R | ||
| Kp_485 | bla KPC | S | S | S | S | S | S | S | S | S | S | ||
| Kp_593 | bla KPC | S | S | R | R | R | R | S | S | R | S | ||
| Kp_605 | bla KPC | S | S | S | S | R | S | R | R | S | S | ||
| Kp_612 | bla KPC | R | R | R | S | S | S | R | R | R | R | ||
| Kp_613 | bla KPC | S | S | S | S | R | R | R | R | R | S | ||
| Kp_654 | blaKPC, blaVIM | S | R | R | S | R | R | R | R | R | R | ||
| Kp_660 | bla KPC | S | S | S | S | S | S | S | S | S | S | ||
| Kp_672 | bla KPC | R | R | R | S | S | S | R | S | R | S | ||
| Kp_506 | FIB KQ | bla KPC | S | S | S | S | S | S | S | S | S | S | 512 |
| Kp_604 | bla KPC | S | R | R | S | S | S | R | R | R | S | ||
| Kp_689 | bla KPC | S | S | S | R | R | R | R | R | S | S | ||
| Kp_690 | bla KPC | S | S | S | R | R | S | S | S | S | S | ||
| Kp_691 | bla KPC | S | S | S | S | S | S | R | R | S | S | ||
| Kp_696 | bla KPC | S | S | S | R | S | S | S | S | S | S | ||
| Kp_712 | bla KPC | S | S | S | S | R | R | R | S | S | S | ||
| Kp_714 | bla KPC | R | R | R | S | S | S | S | S | S | S | ||
| Kp_176 | FIIK, FIB KQ, FIB KN | bla KPC | S | S | S | S | S | S | S | S | S | S | 512 |
| Kp_13 | bla KPC | R | S | S | R | R | R | R | R | R | S | ||
| Kp_59 | bla KPC | S | S | S | R | R | R | S | S | S | S | ||
| Kp_60 | bla KPC | S | S | S | S | R | R | S | S | R | S | ||
| Kp_186 | bla KPC | S | S | S | S | S | S | S | S | S | S | ||
| Kp_187 | bla KPC | S | S | S | S | S | R | S | S | R | S | ||
| Kp_283 | bla KPC | S | S | S | R | S | R | S | S | S | S | ||
| Kp_285 | bla KPC | S | S | S | R | S | R | S | S | S | S | ||
| Kp_673 | bla KPC | S | S | S | S | S | S | S | S | R | S | ||
| Kp_679 | bla KPC | S | S | S | S | S | S | S | S | S | S | ||
| Kp_15 | FIIK, FIB KQ, HI1 | bla KPC | R | S | S | S | S | S | R | S | R | S | 512 |
| Kp_245 | FIIK, FIB KQ, FIB KN, X3 | bla KPC | S | S | S | S | S | R | S | S | S | S | 512 |
| Kp_709 | FIB KN | bla KPC | S | S | S | R | S | R | S | S | S | S | 101 |
| Kp_9 | FIIK, FIB KN | bla KPC | S | S | S | R | S | R | S | R | S | S | 101 |
| Kp_16 | bla KPC | R | S | S | S | S | R | R | S | R | S | ||
| Kp_17 | bla KPC | S | R | R | S | R | S | R | R | R | S | ||
| Kp_284 | bla KPC | S | S | S | S | S | S | S | S | S | S | ||
| Kp_19 | FIIK, FIB KN, A/C | bla KPC | S | R | S | S | R | S | R | R | R | S | 101 |
| Kp_49 | FIB KQ, FIB KN | bla KPC | S | S | S | R | S | R | S | S | S | S | 101 |
| Kp_640 | FIIK, X1,N, M | bla KPC | S | R | R | S | S | S | R | R | R | S | 307 |
| Kp_707 | FIB KQ, FIB KN, HI1 | bla KPC | S | S | S | R | R | R | S | R | R | S | 307 |
| Ec_136 | FIA, FIB, FII | - | S | S | R | S | S | R | R | R | R | S | 405 |
| Ec_705 | FIB KQ, FIB KN | bla KPC | S | S | S | R | R | R | R | R | R | S | 405 |
| Ec_178 | FIIK, FIB KQ, FIA, FIB, I1γ | bla KPC | S | S | S | R | R | R | R | R | R | S | 131 |
a Kp and Ec are abbreviations for the K. pneumoniae and E. coli strains, respectively; b PBRT, PCR-based replicon typing; c CR, carbapenem-resistance; not detected; d CN, gentamycin; AK, amikacin; TOB, tobramycin; TZP, piperacillin/tazobactam; FOS, fosfomycin; AMS, ampicillin-sulbactam; CIP, ciprofloxacin; LEV, levofloxacin; CXM, cefuroxime; SXT, co-trimoxazole; e ST, sequence type.