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. 2021 Jan 12;22(2):712. doi: 10.3390/ijms22020712
JIA Juvenile Idiopathic Arthritis
sJIA Systemic Juvenile Idiopathic Arthritis
WGCNA Weighted Gene Co-expression Network Analysis
MAS Macrophage Activation Syndrome
DEG Differentially Expressed Gene
IL-1 Interleukin 1
IL-6 Interleukin 6
TNF-α Tumor necrosis factor-α
NCBI National Center for Biotechnology Information
GEO Gene Expression Omnibus
PCA Principal Component Analysis
FDR False Discovery Rate
Log2FC Log2(Fold Change)
NGS Next Generation Sequencing
RNA-seq RNA-sequencing
PBMC Peripheral Blood Mononuclear Cell
ME Module Eigengene
GO BP Gene Ontology Biological Process
DAVID Database for Annotation, Visualization, and Integrated Discovery
PPI Protein–Protein Interaction
STRING Search Tool for the Retrieval of Interacting Genes
MCODE Molecular Complex Detection
DEFA4 Defensin alpha 4
OLFM4 Olfactomedin 4
ORM1 Orosomucoid 1
TCN1 Transcobalamin 1
GZMB Granzyme B
KLR Killer cell lectin-like receptor
KLRG1 Killer cell lectin-like receptor G1
IL2RB Interleukin 2 receptor subunit beta
TBX21 T-box transcription factor 21
CMap Connectivity Map
W-13 N-(4-aminobutyl)-5-chloronaphthalene-2-sulfonamide
MANTRA Mode of Action by Network Analysis
MOAs Mechanisms of Actions
GWAS Genome-Wide Association Study
eQTL Expression Quantitative Trait Loci
MSigDB Molecular Signatures DataBase