| GhWOX | Gossypium hirsutum WUSCHEL-Related homeobox |
| AUX/1AA | Auxin/Indole-acetic-acid |
| bHLH | Basic-helix-loop-helix protein |
| WRKY | Transcription factor (TF), partake WRKYGQK heptapeptide at N-terminal |
| MYB | Myeloblastosis (Avian Myeloblastosis Viral Oncogene Homolog) TF |
| myc | Melocytomatosis (isolated from an avian myelocytomatosis virus) TF |
| TRV | Tobacco rattle virus |
| ERF | Ethylene response factor |
| YFP | Yellow-fluorescent protein |
| PDS | Phytoene-desaturase |
| ROS | Reactive oxygen species |
| FDR | False discovery rate |
| PYR/PYL | Pyrabactin resistance1/PYR1; PYR-like (PYL) |
| CBL | Calcineurin B-like protein |
| AP2/EREBP | Apetala2/Ethylene response element binding protein |
| AGD1 | ADP-Ribosylation factor GTPase-activating protein domain |
| ARF | Auxin response factor |
| ARE | Auxin response element |
| SAUR | Small-auxin upregulated RNA |
| ABRE/ABF | ABA-responsive element/ABRE-binding factor |
| AIP1 | Actin-interacting protein1 |
| CYPs | Cytochrome 450 proteins |
| GA2OX8/GASA4 | Gibbrellin 2-Oxidase; Gibbrellic acid stimulated Arabidopsis |
| HB/HD | Homeobox/Homeobox-domain |
| GRAS | GIBBERELLIC ACID INSENSITIVE (GAI), REPRESSOR OF GA1 (RGA), and SCARECROW (SCR) |
| LOB | Lateral-organ-boundaries domain |
| bZIP | Bacic-leucine zipper |
| ATHB | Arabidopsis thaliana-Homeobox |
| ANL | Anthocyanin-Less |
| LHW | Lonesome-highway |
| RF2B | Fertility restorer-B |
| RVE7 | Protein REVEILLE7 |
| HAT | HD-Zip protein |
| STRE | StuA-response element |
| MES | Morpholinoethanesulfonic acid |
| pEG101 | pEarleyGate101 (vector) |
| ATP | Adenosine tri-phosphate |